RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 FAM83CQ9BQN1 747 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 TDRD1Q9BXT4 1180 aaKnown RBP23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 ZNF180Q9UJW8 692 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 ARIH1Q9Y4X5 557 aaPredicted RBP23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 DENND4AQ7Z401 1863 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 NFATC1O95644 943 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 INHBAP08476 426 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 SRCP12931 536 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 ARSAP15289 507 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 POU3F3P20264 500 aaPredicted RBP23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 HPDP32754 393 aaPredicted RBP23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 MGAT5Q09328 741 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 NR1H3Q13133 447 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 GRIN2CQ14957 1233 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 MARK2Q7KZI7 788 aaKnown RBP23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 NAT16Q8N8M0 369 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 E2F7Q96AV8 911 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 ZFP14Q9HCL3 533 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 CLDND1Q9NY35 253 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 DOCK8Q8NF50 2099 aa23.11■■□□□ 1.29
SMARCB1-201ENST00000263121 A0A1W2PPC1 479 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 FOXO6A8MYZ6 492 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 ZNF821O75541 412 aaPredicted RBP23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 LTBRP36941 435 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 CSNK1DP48730 415 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 AP1S1P61966 158 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 PPP2R2AP63151 447 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 SULT2A1Q06520 285 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 NAB1Q13506 487 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 ATXN7L2Q5T6C5 722 aaPredicted RBP23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 VITQ6UXI7 678 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 SRLQ86TD4 932 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 TRABD2AQ86V40 505 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 AHI1Q8N157 1196 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 MZB1Q8WU39 189 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 ATP2A3Q93084 1043 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 ZFYVE19Q96K21 471 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 MSLNLQ96KJ4 702 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 RIPOR3Q96MK2 946 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 THG1LQ9NWX6 298 aaKnown RBP23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 ADAM21Q9UKJ8 722 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 RAI2Q9Y5P3 530 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 IKBKGQ9Y6K9 419 aa23.1■■□□□ 1.29
SMARCB1-201ENST00000263121 HEATR9A2RTY3 570 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 UGT1A9O60656 530 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 PRLP01236 227 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 CISD3P0C7P0 127 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 STK19P49842 368 aaPredicted RBP23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 FCHO2Q0JRZ9 810 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ADGRE1Q14246 886 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 GALNT3Q14435 633 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 PDGFRLQ15198 375 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 TAOK1Q7L7X3 1001 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 CDKL2Q92772 493 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ISG20Q96AZ6 181 aaKnown RBP23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 RPL10LQ96L21 214 aaKnown RBP23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 TM6SF2Q9BZW4 377 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 EBF3Q9H4W6 596 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 UGT1A7Q9HAW7 530 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 UGT1A10Q9HAW8 530 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 UGT1A8Q9HAW9 530 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 TREX1Q9NSU2 369 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 SLC25A13Q9UJS0 675 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 CHKBQ9Y259 395 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ACTL7BQ9Y614 415 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 PRRC2BQ5JSZ5 2229 aaKnown RBP23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 TRIM24O15164 1050 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ERVK-10P10266 1014 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ALADP13716 330 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 TRAF2Q12933 501 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 GAB4Q2WGN9 574 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 TMEM215Q68D42 235 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ETFBKMTQ8IXQ9 262 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ARFGAP2Q8N6H7 521 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 ST13P5Q8NFI4 369 aaPredicted RBP23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 PPANQ9NQ55 473 aaKnown RBP23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 PCDHGC4Q9Y5F7 938 aa23.09■■□□□ 1.29
SMARCB1-201ENST00000263121 FAM155BO75949 473 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 MTHFRP42898 656 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 ECT2LQ008S8 904 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 SEPT6Q14141 434 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 GEN1Q17RS7 908 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 DGKKQ5KSL6 1271 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 MBLAC2Q68D91 279 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 RASSF3Q86WH2 238 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 C12orf40Q86WS4 652 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 MFSD6LQ8IWD5 586 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 HPS4Q9NQG7 708 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 IL1RAPL1Q9NZN1 696 aa23.08■■□□□ 1.29
SMARCB1-201ENST00000263121 COL4A3Q01955 1670 aa23.08■■□□□ 1.28
SMARCB1-201ENST00000263121 IQANK1A0A1B0GTG1 560 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 MROH6A6NGR9 719 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 LAMP2P13473 410 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 KRT15P19012 456 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 MAPK8P45983 427 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 DGKGP49619 791 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 ATP1A2P50993 1020 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 ESRP1Q6NXG1 681 aaKnown RBP23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 C22orf39Q6P5X5 142 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 CEP44Q9C0F1 390 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms