RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 VPS4BO75351 444 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 CREB1P16220 341 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 FUT4P22083 530 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 PEX2P28328 305 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 ACSM2AQ08AH3 577 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ZNF846Q147U1 533 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 NDUFAF6Q330K2 333 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 PCID2Q5JVF3 399 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 SDHAF4Q5VUM1 108 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ACSM2BQ68CK6 577 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 APTXQ7Z2E3 356 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 TMEM139Q8IV31 216 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 SFRP1Q8N474 314 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 DCBLD1Q8N8Z6 715 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 GRIN3AQ8TCU5 1115 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 DNAJC19Q96DA6 116 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 PTCD3Q96EY7 689 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 TUT1Q9H6E5 874 aaKnown RBP12.15□□□□□ -0.46
SMG6-201ENST00000263073 ZDHHC6Q9H6R6 413 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 STON1Q9Y6Q2 735 aa12.15□□□□□ -0.46
SMG6-201ENST00000263073 ANKDD1BA6NHY2 528 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 HACD1B0YJ81 288 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 PRKCIP41743 596 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 RAB10P61026 200 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 GSTA3Q16772 222 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 FAM187BQ17R55 369 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 CERCAMQ5T4B2 595 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 FAM131AQ6UXB0 335 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 PQLC1Q8N2U9 271 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 POMGNT2Q8NAT1 580 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 OR5B17Q8NGF7 314 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 NAT14Q8WUY8 206 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 MRPS31Q92665 395 aaKnown RBP12.15□□□□□ -0.47
SMG6-201ENST00000263073 RNF157Q96PX1 679 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 OSBPL6Q9BZF3 934 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 CLN6Q9NWW5 311 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 ARHGAP28Q9P2N2 729 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 CDH22Q9UJ99 828 aa12.15□□□□□ -0.47
SMG6-201ENST00000263073 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.15□□□□□ -0.47
SMG6-201ENST00000263073 KCNU1A8MYU2 1149 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 LOC110117498-PIK3R3F6TDL0 507 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CKBP12277 381 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 ITGA1P56199 1179 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 ATAD3BQ5T9A4 648 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 BRSK2Q8IWQ3 736 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 FAM20CQ8IXL6 584 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 NDRG1Q92597 394 aaKnown RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 SMARCD1Q96GM5 515 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 PRKD2Q9BZL6 878 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 STN1Q9H668 368 aaKnown RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 TMPRSS4Q9NRS4 437 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CCDC189A1A4V9 331 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CHURC1-FNTBB4DL54 471 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 DDX3YO15523 660 aaKnown RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 ITGAVP06756 1048 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 GUCA1AP43080 201 aaPredicted RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 SIM2Q14190 667 aaPredicted RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 GRIK5Q16478 980 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 SWT1Q5T5J6 900 aaKnown RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 BTN2A1Q7KYR7 527 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CLIP4Q8N3C7 705 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 JOSD2Q8TAC2 188 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 GPR152Q8TDT2 470 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 DGCR14Q96DF8 476 aaKnown RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 TMEM169Q96HH4 297 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 IL22Q9GZX6 179 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 NKIRAS2Q9NYR9 191 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CPA4Q9UI42 421 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 LYNP07948 512 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 GABRB2P47870 512 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 FAM171A1Q5VUB5 890 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 LIPMQ5VYY2 423 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 DEF8Q6ZN54 512 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 AMER2Q8N7J2 671 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 MCOLN3Q8TDD5 553 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 DMRTB1Q96MA1 342 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 OSBPL7Q9BZF2 842 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 EBF3Q9H4W6 596 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CIDEBQ9UHD4 219 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 GSTK1Q9Y2Q3 226 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 F7P08709 466 aaPredicted RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 ENO2P09104 434 aaPredicted RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 OR56A5P0C7T3 313 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CTPS1P17812 591 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 GTF2A2P52657 109 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 ADAM17P78536 824 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 RHAGQ02094 409 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 PITRM1Q5JRX3 1037 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 WSCD1Q658N2 575 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 ZNF549Q6P9A3 640 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 FAM71AQ8IYT1 594 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 EMILIN2Q9BXX0 1053 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 RAP2CQ9Y3L5 183 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 UMODL1Q5DID0 1318 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 NOS1APO75052 506 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms