RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CHMP1AQ9HD42 196 aaPredicted RBP12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 GRIP1Q9Y3R0 1128 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 MYBPC3Q14896 1274 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 PLEKHH3Q7Z736 793 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 RERGQ96A58 199 aaPredicted RBP12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 KCNS3Q9BQ31 491 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 TELO2Q9Y4R8 837 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 HNRNPLP14866 589 aaKnown RBP eCLIP12.54□□□□□ -0.45e-8■□□□□ 8.5
ARFGEF1-201ENST00000262215 PAPD7Q5XG87 772 aaKnown RBP12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 FAM91A1Q658Y4 838 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 CAMK1DQ8IU85 385 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 MCOLN2Q8IZK6 566 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 ARHGAP20Q9P2F6 1191 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 TBC1D30Q9Y2I9 924 aa12.54□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZW10O43264 779 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ANXA5P08758 320 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 AMPD2Q01433 879 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 NAB1Q13506 487 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 RIPK1Q13546 671 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 C15orf59Q2T9L4 293 aaPredicted RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 TTMPQ5BVD1 217 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 USP45Q70EL2 814 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 TSEN15Q8WW01 171 aaKnown RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 CTDNEP1O95476 244 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 IL1BP01584 269 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 DGKAP23743 735 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 IRGCQ6NXR0 463 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ABRAXAS1Q6UWZ7 409 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 OR52K2Q8NGK3 314 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 FAM81AQ8TBF8 368 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 TDRD1Q9BXT4 1180 aaKnown RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 FAM192AQ9GZU8 254 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 UCKL1Q9NWZ5 548 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 GMEB1Q9Y692 573 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 SCAMP1O15126 338 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 MTX3Q5HYI7 312 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF484Q5JVG2 852 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 BHLHB9Q6PI77 547 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 CRTC3Q6UUV7 619 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 TNS4Q8IZW8 715 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 CCDC54Q8NEL0 328 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 RNF31Q96EP0 1072 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 PANX1Q96RD7 426 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ENTPD5O75356 428 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 PRH1P02810 166 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 PIK3CGP48736 1102 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 MAXP61244 160 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ANKRD13AQ8IZ07 590 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 OR2L3Q8NG85 312 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZSCAN5BA6NJL1 495 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 NADKO95544 446 aaPredicted RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ATF4P18848 351 aaPredicted RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 MXD1Q05195 221 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 DNASE1L3Q13609 305 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 TTC27Q6P3X3 843 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 GPR65Q8IYL9 337 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 CLIP4Q8N3C7 705 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF606Q8WXB4 792 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 CHST7Q9NS84 486 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 NCAM2O15394 837 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 INMTO95050 263 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF844Q08AG5 666 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ACAP2Q15057 778 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 MPPE1Q53F39 396 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 INTS11Q5TA45 600 aaKnown RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF549Q6P9A3 640 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZBTB45Q96K62 511 aaPredicted RBP12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 PFDN2Q9UHV9 154 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 ATP10AO60312 1499 aa12.53□□□□□ -0.4
ARFGEF1-201ENST00000262215 AZGP1P25311 298 aaKnown RBP12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 GRIA4P48058 902 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 UNC5AQ6ZN44 842 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 ANKFN1Q8N957 763 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 OR10H5Q8NGA6 315 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 OR6K2Q8NGY2 324 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 SKA1Q96BD8 255 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 BARX2Q9UMQ3 279 aaPredicted RBP12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 ANKRD6Q9Y2G4 727 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 A0A087X1B8 175 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 RSL1D1O76021 490 aaKnown RBP12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 ICAM1P05362 532 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 KLRK1P26718 216 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 AKAP14Q86UN6 197 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 KCTD4Q8WVF5 259 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 MTMR8Q96EF0 704 aa12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 INTS10Q9NVR2 710 aaKnown RBP12.52□□□□□ -0.4
ARFGEF1-201ENST00000262215 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms