RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 GABRG2P18507 467 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 ITIH2P19823 946 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 TNFRSF8P28908 595 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 NSUN2Q08J23 767 aaKnown RBP eCLIP20.94■□□□□ 0.94
RTCA-201ENST00000260563 CALCOCO2Q13137 446 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 IZUMO3Q5VZ72 239 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 TMPRSS6Q8IU80 811 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 MMAAQ8IVH4 418 aaKnown RBP20.94■□□□□ 0.94
RTCA-201ENST00000260563 PGBD3Q8N328 593 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 MDGA1Q8NFP4 955 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 FAM129BQ96TA1 746 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 LRFN3Q9BTN0 628 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 SLC6A17Q9H1V8 727 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 GRHL1Q9NZI5 618 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 EVLQ9UI08 416 aaPredicted RBP20.94■□□□□ 0.94
RTCA-201ENST00000260563 RAB21Q9UL25 225 aa20.94■□□□□ 0.94
RTCA-201ENST00000260563 TPX2Q9ULW0 747 aaKnown RBP20.94■□□□□ 0.94
RTCA-201ENST00000260563 C1QTNF3-AMACRE9PGA6 284 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 METTL18O95568 372 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 POP4O95707 220 aaKnown RBP20.93■□□□□ 0.94
RTCA-201ENST00000260563 IL1BP01584 269 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 CTSLP07711 333 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 MAPK8P45983 427 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 PSMD8P48556 350 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 CSNK1DP48730 415 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 CARSP49589 748 aaKnown RBP20.93■□□□□ 0.94
RTCA-201ENST00000260563 SCNN1BP51168 640 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 BASP1P80723 227 aaKnown RBP20.93■□□□□ 0.94
RTCA-201ENST00000260563 MYLK3Q32MK0 819 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 ITPRIPL1Q6GPH6 555 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 KIAA1324Q6UXG2 1013 aaKnown RBP20.93■□□□□ 0.94
RTCA-201ENST00000260563 PCGF5Q86SE9 256 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 TAB3Q8N5C8 712 aaPredicted RBP20.93■□□□□ 0.94
RTCA-201ENST00000260563 CNTD1Q8N815 330 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 PRCCQ92733 491 aaPredicted RBP20.93■□□□□ 0.94
RTCA-201ENST00000260563 SIPA1Q96FS4 1042 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 MRGPRX1Q96LB2 322 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 NUDCD1Q96RS6 583 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 SCUBE2Q9NQ36 999 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 RAB6BQ9NRW1 208 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 ATP8A1Q9Y2Q0 1164 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 WASF2Q9Y6W5 498 aa20.93■□□□□ 0.94
RTCA-201ENST00000260563 NDC80O14777 642 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 ADH1BP00325 375 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 DNTTP04053 509 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 CR2P20023 1033 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 CD68P34810 354 aaPredicted RBP20.92■□□□□ 0.94
RTCA-201ENST00000260563 NUBP1P53384 320 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 AP1S1P61966 158 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 RPS14P62263 151 aaKnown RBP20.92■□□□□ 0.94
RTCA-201ENST00000260563 GRM3Q14832 879 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 PARP6Q2NL67 630 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 RALGPS1Q5JS13 557 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 ALG1LQ6GMV1 187 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 TSSK4Q6SA08 328 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 SRLQ86TD4 932 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 RASSF3Q86WH2 238 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 PIP4K2CQ8TBX8 421 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 LRIG1Q96JA1 1093 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 GBA3Q9H227 469 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 ETNK1Q9HBU6 452 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 RSPH14Q9UHP6 348 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 FBXO4Q9UKT5 387 aa20.92■□□□□ 0.94
RTCA-201ENST00000260563 INSIG1O15503 277 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 LEFTY1O75610 366 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 ACADMP11310 421 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 GKP32189 559 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 FDFT1P37268 417 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 ITGA8P53708 1063 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 CSTF1Q05048 431 aaKnown RBP20.91■□□□□ 0.94
RTCA-201ENST00000260563 HLTFQ14527 1009 aaKnown RBP eCLIP20.91■□□□□ 0.94
RTCA-201ENST00000260563 CST6Q15828 149 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 TTC31Q49AM3 519 aaPredicted RBP20.91■□□□□ 0.94
RTCA-201ENST00000260563 ARSIQ5FYB1 569 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 RNASEH2BQ5TBB1 312 aaKnown RBP20.91■□□□□ 0.94
RTCA-201ENST00000260563 FAXCQ5TGI0 409 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 FAM46CQ5VWP2 391 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 CCNI2Q6ZMN8 369 aaPredicted RBP20.91■□□□□ 0.94
RTCA-201ENST00000260563 EIF1ADQ8N9N8 165 aaKnown RBP20.91■□□□□ 0.94
RTCA-201ENST00000260563 TMIEQ8NEW7 156 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 ART4Q93070 314 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 SEMA3CQ99985 751 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 OSBPL1AQ9BXW6 950 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 EBF1Q9UH73 591 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 PPM1HQ9ULR3 514 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 NFU1Q9UMS0 254 aa20.91■□□□□ 0.94
RTCA-201ENST00000260563 GJB3O75712 270 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 NFKB1P19838 968 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 PSMB4P28070 264 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 ECHS1P30084 290 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 PXNP49023 591 aaPredicted RBP20.9■□□□□ 0.94
RTCA-201ENST00000260563 PLTPP55058 493 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 ZBTB16Q05516 673 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 HIBCHQ6NVY1 386 aaPredicted RBP20.9■□□□□ 0.94
RTCA-201ENST00000260563 ZDHHC24Q6UX98 284 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 PPIL6Q8IXY8 311 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 MAML2Q8IZL2 1156 aaPredicted RBP20.9■□□□□ 0.94
RTCA-201ENST00000260563 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.9■□□□□ 0.94
RTCA-201ENST00000260563 CPT1BQ92523 772 aa20.9■□□□□ 0.94
RTCA-201ENST00000260563 PPP1R16AQ96I34 528 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms