RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 CXorf40AQ8TE69 158 aa18.72■□□□□ 0.59
KHDC1-201ENST00000257765 PRR11Q96HE9 360 aaPredicted RBP18.72■□□□□ 0.59
KHDC1-201ENST00000257765 GDAP1L1Q96MZ0 367 aa18.72■□□□□ 0.59
KHDC1-201ENST00000257765 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.72■□□□□ 0.59
KHDC1-201ENST00000257765 STK33Q9BYT3 514 aa18.72■□□□□ 0.59
KHDC1-201ENST00000257765 SYNDIG1Q9H7V2 258 aa18.72■□□□□ 0.59
KHDC1-201ENST00000257765 PNMA8BQ9ULN7 279 aaPredicted RBP18.72■□□□□ 0.59
KHDC1-201ENST00000257765 SSUH2Q9Y2M2 353 aa18.72■□□□□ 0.59
KHDC1-201ENST00000257765 ZSCAN5CA6NGD5 496 aaPredicted RBP18.71■□□□□ 0.59
KHDC1-201ENST00000257765 CDRT15L2A8MXV6 281 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 FAM72CH0Y354 149 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 TOR1BO14657 336 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 MMP20O60882 483 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 TMCC1O94876 653 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 IGSF6O95976 241 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 MLLT3P42568 568 aaPredicted RBP18.71■□□□□ 0.59
KHDC1-201ENST00000257765 RAD51Q06609 339 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 SPIDRQ14159 915 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 DPCR1Q3MIW9 517 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 FAXCQ5TGI0 409 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 FAM72AQ5TYM5 149 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 FAM72DQ6L9T8 149 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 ESRP1Q6NXG1 681 aaKnown RBP18.71■□□□□ 0.59
KHDC1-201ENST00000257765 STRADAQ7RTN6 431 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 FAM72BQ86X60 149 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 ZNF354CQ86Y25 554 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 ARL14Q8N4G2 192 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 WDR36Q8NI36 951 aaKnown RBP18.71■□□□□ 0.59
KHDC1-201ENST00000257765 SLC20A1Q8WUM9 679 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 TTC9Q92623 222 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 EPAS1Q99814 870 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 CCDC3Q9BQI4 270 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 C11orf70Q9BRQ4 267 aa18.71■□□□□ 0.59
KHDC1-201ENST00000257765 NOCTQ9UK39 431 aaKnown RBP18.71■□□□□ 0.59
KHDC1-201ENST00000257765 FLNBO75369 2602 aaKnown RBP18.71■□□□□ 0.59
KHDC1-201ENST00000257765 ASH1LQ9NR48 2969 aaKnown RBP18.71■□□□□ 0.59
KHDC1-201ENST00000257765 CCDC187A0A096LP49 1063 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 PMS2P1A4D2B8 440 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 C2CD4BA6NLJ0 364 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 J3QKU1 62 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 BUB1O43683 1085 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 KDELR3O43731 214 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 CYP1A1P04798 512 aaPredicted RBP18.7■□□□□ 0.58
KHDC1-201ENST00000257765 PLEKP08567 350 aaPredicted RBP18.7■□□□□ 0.58
KHDC1-201ENST00000257765 TSHRP16473 764 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 MMP8P22894 467 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 EIF4A3P38919 411 aaKnown RBP18.7■□□□□ 0.58
KHDC1-201ENST00000257765 PTPN9P43378 593 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 PDX1P52945 283 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 PPARDQ03181 441 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 PHLDB2Q86SQ0 1253 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 CCDC185Q8N715 623 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 TP53I13Q8NBR0 393 aaPredicted RBP18.7■□□□□ 0.58
KHDC1-201ENST00000257765 JOSD2Q8TAC2 188 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 GPT2Q8TD30 523 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 CASKIN2Q8WXE0 1202 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 SEMA4CQ9C0C4 833 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 TTYH3Q9C0H2 523 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 CLPBQ9H078 707 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 MBNL1Q9NR56 388 aaKnown RBP18.7■□□□□ 0.58
KHDC1-201ENST00000257765 DACH1Q9UI36 760 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 PADI4Q9UM07 663 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 DOLKQ9UPQ8 538 aa18.7■□□□□ 0.58
KHDC1-201ENST00000257765 K7ENP7 123 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 YY2O15391 372 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 TNFSF15O95150 251 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 ERCC5P28715 1186 aaPredicted RBP18.69■□□□□ 0.58
KHDC1-201ENST00000257765 BLKP51451 505 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 RHOAP61586 193 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 CDR2Q01850 454 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 LY6DQ14210 128 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 IRF4Q15306 451 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 KLHL40Q2TBA0 621 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 INO80CQ6PI98 192 aaPredicted RBP18.69■□□□□ 0.58
KHDC1-201ENST00000257765 CLEC14AQ86T13 490 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 FSTL5Q8N475 847 aaPredicted RBP18.69■□□□□ 0.58
KHDC1-201ENST00000257765 ARL10Q8N8L6 244 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 FAM172AQ8WUF8 416 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 NTAN1Q96AB6 310 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 WRAP53Q9BUR4 548 aaKnown RBP18.69■□□□□ 0.58
KHDC1-201ENST00000257765 MAGEB5Q9BZ81 275 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 DKK3Q9UBP4 350 aa18.69■□□□□ 0.58
KHDC1-201ENST00000257765 ANKRD36A6QL64 1941 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 CASC3O15234 703 aaKnown RBP18.68■□□□□ 0.58
KHDC1-201ENST00000257765 GFPT2O94808 682 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 GJB6O95452 261 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 CELA2BP08218 269 aaPredicted RBP18.68■□□□□ 0.58
KHDC1-201ENST00000257765 ITGA2BP08514 1039 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 HDAC4P56524 1084 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 FMO1Q01740 532 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 ELOCQ15369 112 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 CCDC81Q6ZN84 652 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 RTL3Q8N8U3 475 aaKnown RBP18.68■□□□□ 0.58
KHDC1-201ENST00000257765 SLC30A5Q8TAD4 765 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 SCG3Q8WXD2 468 aaKnown RBP18.68■□□□□ 0.58
KHDC1-201ENST00000257765 CENPIQ92674 756 aaPredicted RBP18.68■□□□□ 0.58
KHDC1-201ENST00000257765 GANQ9H2C0 597 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 MFHAS1Q9Y4C4 1052 aa18.68■□□□□ 0.58
KHDC1-201ENST00000257765 NTN3O00634 580 aaPredicted RBP18.67■□□□□ 0.58
KHDC1-201ENST00000257765 ALPIP09923 528 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms