RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 NUMA1Q14980 2115 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 OTOGLQ3ZCN5 2332 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 A0A1B0GVT2 93 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 A0A1W2PQU0 124 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 GOLGA6L3A6NEY3 463 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 C4orf47A7E2U8 309 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 ZNF487B1APH4 448 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 MATN3O15232 486 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 LATO43561 262 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 PCDH8O95206 1070 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 PIGNO95427 931 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 SYPP08247 313 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 ITIH2P19823 946 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 SDHBP21912 280 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 CCNCP24863 283 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 GARSP41250 739 aaKnown RBP8.62□□□□□ -1.03
TMEM258-201ENST00000257262 ABL2P42684 1182 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 MAPK8P45983 427 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 MARCKSL1P49006 195 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 SCNN1BP51168 640 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 RENBPP51606 427 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 AFF3P51826 1226 aaKnown RBP8.62□□□□□ -1.03
TMEM258-201ENST00000257262 DYNLT1P63172 113 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 BNC1Q01954 994 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 GBE1Q04446 702 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 GALNT2Q10471 571 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 KIF5AQ12840 1032 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 ZNF235Q14590 738 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 IFI16Q16666 785 aaKnown RBP8.62□□□□□ -1.03
TMEM258-201ENST00000257262 TMCO4Q5TGY1 634 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 MARC1Q5VT66 337 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 SLC9A4Q6AI14 798 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 NEK5Q6P3R8 708 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 NPNTQ6UXI9 565 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 TTC7BQ86TV6 843 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 TRIM69Q86WT6 500 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 VSIG1Q86XK7 387 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 RFX6Q8HWS3 928 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 CAMK1DQ8IU85 385 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 LRRC49Q8IUZ0 686 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 LRRC8AQ8IWT6 810 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 PGBD5Q8N414 524 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 ATPAF2Q8N5M1 289 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 PLD5Q8N7P1 536 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 OR2I1PQ8NGU4 316 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 KIAA1524Q8TCG1 905 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 NETO1Q8TDF5 533 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 NSMCE1Q8WV22 266 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 KLK6Q92876 244 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 NSMCE3Q96MG7 304 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 PSKH2Q96QS6 385 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 MAK16Q9BXY0 300 aaKnown RBP8.62□□□□□ -1.03
TMEM258-201ENST00000257262 SUV39H2Q9H5I1 410 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 DLL3Q9NYJ7 618 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 DTLQ9NZJ0 730 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 TRIM10Q9UDY6 481 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 SEPT3Q9UH03 358 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 CDV3Q9UKY7 258 aaKnown RBP8.62□□□□□ -1.03
TMEM258-201ENST00000257262 ZFR2Q9UPR6 939 aaKnown RBP8.62□□□□□ -1.03
TMEM258-201ENST00000257262 PCDHB3Q9Y5E6 796 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 HEY1Q9Y5J3 304 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 FADS3Q9Y5Q0 445 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 TP53BP1Q12888 1972 aaPredicted RBP8.62□□□□□ -1.03
TMEM258-201ENST00000257262 TMEM131Q92545 1883 aa8.62□□□□□ -1.03
TMEM258-201ENST00000257262 MACROD2A1Z1Q3 448 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 KCNK3O14649 394 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 APOL1O14791 398 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 SLC30A4O14863 429 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 PSTPIP1O43586 416 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 AP1G1O43747 822 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 ZRANB2O95218 330 aaKnown RBP eCLIP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 WNT1P04628 370 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 KRT10P13645 584 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TIMP2P16035 220 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 CDKN2BP42772 138 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 MMP13P45452 471 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 LIMK1P53667 647 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 ATXN3P54252 364 aaPredicted RBP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 MAXP61244 160 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 RACK1P63244 317 aaKnown RBP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 BCL2L1Q07817 233 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 HNRNPDQ14103 355 aaKnown RBP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 GRM3Q14832 879 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 LLGL1Q15334 1064 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 ZNF284Q2VY69 593 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 LRRC73Q5JTD7 316 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 KAZNQ674X7 775 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 SEL1L3Q68CR1 1132 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TIGD7Q6NT04 549 aaPredicted RBP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 LAYNQ6UX15 382 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 SPOCD1Q6ZMY3 1216 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 HORMAD1Q86X24 394 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 KATNAL2Q8IYT4 538 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 RCOR2Q8IZ40 523 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 BBS5Q8N3I7 341 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 MINDY1Q8N5J2 469 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TEX26Q8N6G2 289 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 CCNYQ8ND76 341 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms