RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 RABGEF1Q9UJ41 708 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 GSAPA4D1B5 854 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 GYG2O15488 501 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 IGHEP01854 428 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 LSM12Q3MHD2 195 aaKnown RBP13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 GPR33Q49SQ1 333 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 LRRC55Q6ZSA7 311 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 MILR1Q7Z6M3 343 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 KLHL29Q96CT2 875 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 ART5Q96L15 291 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 C19orf25Q9UFG5 118 aaPredicted RBP13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 OGDHLQ9ULD0 1010 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 PADI4Q9UM07 663 aa13.53□□□□□ -0.24
PRPF38A-201ENST00000257181 TMEM189-UBE2V1I3L0A0 370 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 HNRNPDQ14103 355 aaKnown RBP13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 AP5B1Q2VPB7 878 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 ZNF662Q6ZS27 426 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 KRT73Q86Y46 540 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 ACMSDQ8TDX5 336 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 GLOD4Q9HC38 313 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 PSMC3P17980 439 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 CDC16Q13042 620 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 FAM124AQ86V42 546 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 C17orf64Q86WR6 236 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 AZIN2Q96A70 460 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC25A51Q9H1U9 297 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 MTRRQ9UBK8 725 aa13.52□□□□□ -0.24
PRPF38A-201ENST00000257181 TRIM49D1C9J1S8 452 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 RPP40O75818 363 aaKnown RBP13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 PPIBP23284 216 aaKnown RBP13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 MBLAC2Q68D91 279 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 PPP4R4Q6NUP7 873 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 CCT7Q99832 543 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 ADA2Q9NZK5 511 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 CCNT2O60583 730 aaKnown RBP13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 ATP13A4Q4VNC1 1196 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 RASIP1Q5U651 963 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 CYP4Z2PQ8N1L4 340 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 NATD1Q8N6N6 113 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF555Q8NEP9 628 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF398Q8TD17 642 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 DIS3LQ8TF46 1054 aaKnown RBP13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 AP2M1Q96CW1 435 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF232Q9UNY5 417 aa13.52□□□□□ -0.25
PRPF38A-201ENST00000257181 RARAP10276 462 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 ERCC2P18074 760 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 PSMD4P55036 377 aaKnown RBP13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 COPZ1P61923 177 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 CYP2U1Q7Z449 544 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 HORMAD1Q86X24 394 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 SH2D3CQ8N5H7 860 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 CEP44Q9C0F1 390 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 RASSF4Q9H2L5 321 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 PARVBQ9HBI1 364 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 CDH7Q9ULB5 785 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 ZBTB39O15060 712 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 KLRC4O43908 158 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 POU6F1Q14863 301 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 COLEC12Q5KU26 742 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 INTS11Q5TA45 600 aaKnown RBP13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 PACS1Q6VY07 963 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 KLHL5Q96PQ7 755 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 RXFP1Q9HBX9 757 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 PAPPA2Q9BXP8 1791 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 PEX12O00623 359 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 INSIG1O15503 277 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 UBXN7O94888 489 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 LTA4HP09960 611 aaKnown RBP13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 RING1Q06587 406 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 NEK5Q6P3R8 708 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 ZSCAN5AQ9BUG6 496 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 FAF1Q9UNN5 650 aaPredicted RBP13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 TGFB1I1O43294 461 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 BNC1Q01954 994 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 PDE1CQ14123 709 aaPredicted RBP13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF470Q6ECI4 717 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 C10orf53Q8N6V4 93 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 OR4L1Q8NH43 312 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 BLOC1S6Q9UL45 172 aa13.51□□□□□ -0.25
PRPF38A-201ENST00000257181 VSTM5A8MXK1 200 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 MATN3O15232 486 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 OR10H2O60403 315 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 STXBP1P61764 594 aaKnown RBP13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 IRF8Q02556 426 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 ACSM2AQ08AH3 577 aa13.5□□□□□ -0.25
PRPF38A-201ENST00000257181 FAM26DQ5JW98 314 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms