RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CPEB1Q9BZB8 566 aaKnown RBP21.33■■□□□ 1.01
NEDD8-201ENST00000250495 DKK3Q9UBP4 350 aa21.33■■□□□ 1.01
NEDD8-201ENST00000250495 SALL4Q9UJQ4 1053 aa21.33■■□□□ 1.01
NEDD8-201ENST00000250495 NBEAQ8NFP9 2946 aa21.33■■□□□ 1
NEDD8-201ENST00000250495 TOR1BO14657 336 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 TPP1O14773 563 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 SPINT1O43278 529 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 BRINP1O60477 761 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 MMP20O60882 483 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 TNFAIP3P21580 790 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 HTR7P34969 479 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 SUOXP51687 545 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 NCAPHQ15003 741 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 SNIP1Q8TAD8 396 aaKnown RBP21.32■■□□□ 1
NEDD8-201ENST00000250495 HCAR2Q8TDS4 363 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 LMX1AQ8TE12 382 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 HMCESQ96FZ2 354 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 IL12RB2Q99665 862 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 KLC2Q9H0B6 622 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 SPASTQ9UBP0 616 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 KLF15Q9UIH9 416 aa21.32■■□□□ 1
NEDD8-201ENST00000250495 LY6G6EA0A0G2JKS1 128 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 MYF5P13349 255 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 TIMP2P16035 220 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 XPAP23025 273 aaPredicted RBP21.31■■□□□ 1
NEDD8-201ENST00000250495 ITPKBP27987 946 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 EIF2B5Q13144 721 aaKnown RBP21.31■■□□□ 1
NEDD8-201ENST00000250495 GRM3Q14832 879 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 ACAP1Q15027 740 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 APTXQ7Z2E3 356 aaKnown RBP21.31■■□□□ 1
NEDD8-201ENST00000250495 VPS36Q86VN1 386 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 LSMEM2Q8N112 164 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 IFI44Q8TCB0 444 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 MYO6Q9UM54 1294 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 U3KQA8 63 aa21.31■■□□□ 1
NEDD8-201ENST00000250495 TPI1P60174 286 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 ELP6Q0PNE2 266 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 CYTH1Q15438 398 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 TBC1D25Q3MII6 688 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 TPRG1LQ5T0D9 272 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 IRF2BP2Q7Z5L9 587 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 DNAAF5Q86Y56 855 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 NETO2Q8NC67 525 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 MAPK15Q8TD08 544 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 GLMNQ92990 594 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 NCAPGQ9BPX3 1015 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 HSD3B7Q9H2F3 369 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 PARVAQ9NVD7 372 aa21.3■■□□□ 1
NEDD8-201ENST00000250495 UBA2Q9UBT2 640 aaPredicted RBP21.3■■□□□ 1
NEDD8-201ENST00000250495 EIF4E1BA6NMX2 242 aaKnown RBP21.29■■□□□ 1
NEDD8-201ENST00000250495 EIF3CLB5ME19 914 aaKnown RBP21.29■■□□□ 1
NEDD8-201ENST00000250495 IGFALSP35858 605 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 NDST2P52849 883 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 KLHL40Q2TBA0 621 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 TMEM52BQ4KMG9 183 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 LRRC73Q5JTD7 316 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 TPCN2Q8NHX9 752 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 CRELD1Q96HD1 420 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 TBATAQ96M53 351 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 EIF3CQ99613 913 aaKnown RBP21.29■■□□□ 1
NEDD8-201ENST00000250495 SLC13A1Q9BZW2 595 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 NAT10Q9H0A0 1025 aaKnown RBP21.29■■□□□ 1
NEDD8-201ENST00000250495 SUV39H2Q9H5I1 410 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 LHX3Q9UBR4 397 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 APOBEC3BQ9UH17 382 aaKnown RBP21.29■■□□□ 1
NEDD8-201ENST00000250495 PCDHB1Q9Y5F3 818 aa21.29■■□□□ 1
NEDD8-201ENST00000250495 CPED1A4D0V7 1026 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 EME2A4GXA9 379 aaPredicted RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 INSIG1O15503 277 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 CSO75390 466 aaKnown RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 MBD3O95983 291 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 ITIH2P19823 946 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 EIF4A3P38919 411 aaKnown RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 RPIAP49247 311 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 MAMLD1Q13495 774 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 CDKN3Q16667 212 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 DEFB133Q30KQ1 61 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 PRRT3Q5FWE3 981 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 FAXCQ5TGI0 409 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 PHACTR4Q8IZ21 702 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 TP53I13Q8NBR0 393 aaPredicted RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 ZNF578Q96N58 590 aaPredicted RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 ZNF641Q96N77 438 aaPredicted RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 WRAP53Q9BUR4 548 aaKnown RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 LRRC19Q9H756 370 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 MBNL1Q9NR56 388 aaKnown RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 BAHCC1Q9P281 2608 aa21.28■■□□□ 1
NEDD8-201ENST00000250495 FASNP49327 2511 aaKnown RBP21.28■■□□□ 1
NEDD8-201ENST00000250495 SHROOM3Q8TF72 1996 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 ARHGAP42A6NI28 874 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 TMEM110-MUSTN1A8MSY1 372 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 USP12O75317 370 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 ATP1A3P13637 1013 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 PSMA2P25787 234 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 LSSP48449 732 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 PEX5P50542 639 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 BLKP51451 505 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 ADKP55263 362 aaKnown RBP21.27■■□□□ 1
NEDD8-201ENST00000250495 OGDHQ02218 1023 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms