RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 HNRNPDQ14103 355 aaKnown RBP24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 STAT4Q14765 748 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 ZNF284Q2VY69 593 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 RALGPS1Q5JS13 557 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 CFAP58Q5T655 872 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 BRAT1Q6PJG6 821 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 IQCHQ86VS3 1027 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 PQLC3Q8N755 202 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 MFSD2AQ8NA29 543 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 FAM174AQ8TBP5 190 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 ZNF830Q96NB3 372 aaPredicted RBP24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 TSGA13Q96PP4 275 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 TRPM6Q9BX84 2022 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 WDR87Q6ZQQ6 2873 aa24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 TP53BP1Q12888 1972 aaPredicted RBP24.62■■□□□ 1.53
SDF2L1-201ENST00000248958 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 A0A1W2PR77 199 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 DCDC2BA2VCK2 349 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 C3orf70A6NLC5 250 aaPredicted RBP24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 UPK3BL1B0FP48 263 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 UPK3BL2E5RIL1 263 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 NEMP1O14524 444 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 DFNA5O60443 496 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 PIGNO95427 931 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 XPAP23025 273 aaPredicted RBP24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 ABL2P42684 1182 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 RGRP47804 291 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 SCNN1BP51168 640 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 BNC1Q01954 994 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 BCL2L1Q07817 233 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 KIF19Q2TAC6 998 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 TMEM259Q4ZIN3 620 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 KIAA1328Q86T90 577 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 GAREM1Q9H706 876 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 AMACRQ9UHK6 382 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 TFR2Q9UP52 801 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 ZFR2Q9UPR6 939 aaKnown RBP24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 REXO2Q9Y3B8 237 aaKnown RBP24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 HYOU1Q9Y4L1 999 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 DOCK9Q9BZ29 2069 aa24.61■■□□□ 1.53
SDF2L1-201ENST00000248958 A0A1W2PQ67 120 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 AREL1O15033 823 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 GJB3O75712 270 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 TNNT1P13805 278 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 CSRP1P21291 193 aaKnown RBP24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 HNRNPA2B1P22626 353 aaKnown RBP24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 AKT2P31751 481 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 MMP13P45452 471 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 NAP1L1P55209 391 aaKnown RBP24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 ELP6Q0PNE2 266 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 HLA-BQ31612 363 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 SLC9A4Q6AI14 798 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 DAAM2Q86T65 1068 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 TEX26Q8N6G2 289 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 ACRBPQ8NEB7 543 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 TPCN2Q8NHX9 752 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 ASB12Q8WXK4 309 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 HDAC11Q96DB2 347 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 NUDCD1Q96RS6 583 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 MGME1Q9BQP7 344 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 SLC17A9Q9BYT1 436 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 SNX11Q9Y5W9 270 aa24.6■■□□□ 1.53
SDF2L1-201ENST00000248958 RCCD1A6NED2 376 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 APOL1O14791 398 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 MATN3O15232 486 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 TIMP2P16035 220 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 CR2P20023 1033 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 CTSKP43235 329 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 POLR2LP62875 67 aaKnown RBP24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 UGP2Q16851 508 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 MAML1Q92585 1016 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 RNF25Q96BH1 459 aaPredicted RBP24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 DTLQ9NZJ0 730 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 TMEM131Q92545 1883 aa24.59■■□□□ 1.53
SDF2L1-201ENST00000248958 DMXL1Q9Y485 3027 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 TLR4O00206 839 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 MUSKO15146 869 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 SLC31A1O15431 190 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 WNT1P04628 370 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 GBE1Q04446 702 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 SGCGQ13326 291 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 TFDP2Q14188 446 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 ZNF423Q2M1K9 1284 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 SEL1L3Q68CR1 1132 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 ERAP2Q6P179 960 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 BZW1Q7L1Q6 419 aaKnown RBP24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 RFX6Q8HWS3 928 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 CAMK1DQ8IU85 385 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 KATNAL2Q8IYT4 538 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 PLD5Q8N7P1 536 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 TMEM145Q8NBT3 493 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 CXorf40AQ8TE69 158 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 SLC32A1Q9H598 525 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 SCUBE2Q9NQ36 999 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 GDF3Q9NR23 364 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 SALL4Q9UJQ4 1053 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 PCDHGB2Q9Y5G2 931 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 HS3ST3A1Q9Y663 406 aa24.58■■□□□ 1.53
SDF2L1-201ENST00000248958 CACNA1AO00555 2505 aa24.57■■□□□ 1.52
SDF2L1-201ENST00000248958 DNAH14Q0VDD8 3507 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms