RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NKX3-2P78367 333 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 TMEM198Q66K66 360 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 LRRC8EQ6NSJ5 796 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 KLHL23Q8NBE8 558 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 PSMG1O95456 288 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 ARSAP15289 507 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 CD151P48509 253 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 ARSDP51689 593 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 CUL3Q13618 768 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 POTEHQ6S545 545 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 LRRC8DQ7L1W4 858 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 TMC7Q7Z402 723 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 TMEM151AQ8N4L1 468 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 SREK1Q8WXA9 508 aaKnown RBP15.91■□□□□ 0.14
LRFN1-201ENST00000248668 PANX3Q96QZ0 392 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 TTC1Q99614 292 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.91■□□□□ 0.14
LRFN1-201ENST00000248668 ZDHHC2Q9UIJ5 367 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 CDY1Q9Y6F8 540 aa15.91■□□□□ 0.14
LRFN1-201ENST00000248668 MTMR11A4FU01 709 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ADAM12O43184 909 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 DLX3O60479 287 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ZNF189O75820 626 aaPredicted RBP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 INHAP05111 366 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 RENBPP51606 427 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 POLD3Q15054 466 aaPredicted RBP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 MAP3K21Q5TCX8 1036 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 RNF220Q5VTB9 566 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ANO7Q6IWH7 933 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 PGBD5Q8N414 524 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 SCLYQ96I15 445 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 EXOC2Q96KP1 924 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 C8orf48Q96LL4 319 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 PLA2G4CQ9UP65 541 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 VWA8A3KMH1 1905 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 CIB2O75838 187 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 BAG2O95816 211 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 HNRNPLP14866 589 aaKnown RBP eCLIP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 SERPINH1P50454 418 aaKnown RBP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 COPAP53621 1224 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ZNF33AQ06730 810 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 GALNT3Q14435 633 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 TCTN1Q2MV58 587 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 MUM1Q2TAK8 710 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 AFMIDQ63HM1 303 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 FAM91A1Q658Y4 838 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 KDELC1Q6UW63 502 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ARHGAP24Q8N264 748 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 BLOC1S5Q8TDH9 187 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 SH3RF2Q8TEC5 729 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 HEXDCQ8WVB3 486 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 NRG4Q8WWG1 115 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 FUBP3Q96I24 572 aaKnown RBP eCLIP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 OLFM1Q99784 485 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 NACA2Q9H009 215 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ILKAPQ9H0C8 392 aaPredicted RBP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 SLC25A51Q9H1U9 297 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 PRDM5Q9NQX1 630 aaPredicted RBP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 LMCD1Q9NZU5 365 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 LRFN2Q9ULH4 789 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 CRYL1Q9Y2S2 319 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 A0A0D9SEW6 157 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ENPP3O14638 875 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 TLR5O60602 858 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 RAMP2O60895 175 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ALDH2P05091 517 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 RHOQP17081 205 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 AOC1P19801 751 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 DBN1Q16643 649 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 PPM1LQ5SGD2 360 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 SNX30Q5VWJ9 437 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ZYG11AQ6WRX3 759 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ENDOVQ8N8Q3 282 aaKnown RBP15.9■□□□□ 0.14
LRFN1-201ENST00000248668 ATP6V0D2Q8N8Y2 350 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 OR6Y1Q8NGX8 325 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 EXT2Q93063 718 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 TREX1Q9NSU2 369 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 DNAJC28Q9NX36 388 aa15.9■□□□□ 0.14
LRFN1-201ENST00000248668 MUSKO15146 869 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 CABYRO75952 493 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 PAMP19021 973 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 LIPMQ5VYY2 423 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 FUT10Q6P4F1 479 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 FRMD7Q6ZUT3 714 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 ZNF683Q8IZ20 524 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 DRAXINQ8NBI3 349 aaPredicted RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 HDAC10Q969S8 669 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 SEMA3CQ99985 751 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 SPON2Q9BUD6 331 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TRIM4Q9C037 500 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TCF7L2Q9NQB0 619 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 MARCH5Q9NX47 278 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 FNDC3AQ9Y2H6 1198 aaKnown RBP15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TBKBP1A7MCY6 615 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 AP3B1O00203 1094 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TM7SF2O76062 418 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 VNN2O95498 520 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 ALDH1A1P00352 501 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 SLC2A3P11169 496 aa15.89■□□□□ 0.13
LRFN1-201ENST00000248668 TSPAN8P19075 237 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms