RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PRMT6Q96LA8 375 aaPredicted RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 FCRL4Q96PJ5 515 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 DNTTP04053 509 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 RASA1P20936 1047 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 SCIMPQ6UWF3 145 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 ZNF611Q8N823 705 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 C12orf50Q8NA57 414 aaPredicted RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 C2orf49Q9BVC5 232 aaPredicted RBP13.31□□□□□ -0.28
NEK9-201ENST00000238616 SPATA5L1Q9BVQ7 753 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 GSDMCQ9BYG8 508 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 GANQ9H2C0 597 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 TMPRSS4Q9NRS4 437 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 NUP205Q92621 2012 aa13.31□□□□□ -0.28
NEK9-201ENST00000238616 TMEM150BA6NC51 233 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 HSF2Q03933 536 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 SP140Q13342 867 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 SAMD4BQ5PRF9 694 aaKnown RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
NEK9-201ENST00000238616 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 XRRA1Q6P2D8 792 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 COL23A1Q86Y22 540 aaPredicted RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 SAMD9LQ8IVG5 1584 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 ANKRD6Q9Y2G4 727 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 PSEN2P49810 448 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 GPR135Q8IZ08 494 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 CCDC115Q96NT0 180 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 MRPL9Q9BYD2 267 aaKnown RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 A0A087X0B3 334 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 PABPC1LQ4VXU2 614 aaKnown RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 FNBP1LQ5T0N5 605 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 DGLUCYQ7Z3D6 616 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 CFAP52Q8N1V2 620 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 FEM1CQ96JP0 617 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 MNTQ99583 582 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 MTA3Q9BTC8 594 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 ABCB10Q9NRK6 738 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 CCL16O15467 120 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 TMCC2O75069 709 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 PLGP00747 810 aaPredicted RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 TCF4P15884 667 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 GNALP38405 381 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 ACLYP53396 1101 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 SLC12A3P55017 1021 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 MGAT5Q09328 741 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 ITIH4Q14624 930 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 CRY2Q49AN0 593 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 C4orf46Q504U0 113 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 TCEAL6Q6IPX3 200 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 FAM151BQ6UXP7 276 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 FRRS1Q6ZNA5 592 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 ARHGAP36Q6ZRI8 547 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 GALNT7Q86SF2 657 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 C9orf16Q9BUW7 83 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 ASF1AQ9Y294 204 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 SLC28A1O00337 649 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 DDNO94850 711 aaPredicted RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 SLC35G4P0C7Q5 338 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 STK40Q8N2I9 435 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 OR10H5Q8NGA6 315 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 LMLNQ96KR4 655 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 TDRD6O60522 2096 aaKnown RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 QSOX1O00391 747 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 SLC26A4O43511 780 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 HMGCRP04035 888 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 SSTR1P30872 391 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 GRIA3P42263 894 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 UGT2B15P54855 530 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 CYB5D1Q6P9G0 228 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 ZNF433Q8N7K0 673 aaPredicted RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 GAD1Q99259 594 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 ERGIC3Q9Y282 383 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 A0A1W2PQJ5 194 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 CACNB4O00305 520 aaPredicted RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 FAM228BP0C875 321 aa13.3□□□□□ -0.28
NEK9-201ENST00000238616 EMID1Q96A84 441 aaPredicted RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 QKIQ96PU8 341 aaKnown RBP eCLIP13.3□□□□□ -0.28
NEK9-201ENST00000238616 TIMM8BQ9Y5J9 83 aaPredicted RBP13.3□□□□□ -0.28
NEK9-201ENST00000238616 GAKO14976 1311 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 CXCR2P25025 360 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 MRPS22P82650 360 aaKnown RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 CHST4Q8NCG5 386 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 TATDN2Q93075 761 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 MYLPFQ96A32 169 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RNF31Q96EP0 1072 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 CDRT15Q96T59 188 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 NDRG2Q9UN36 371 aaKnown RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 UNC13BO14795 1591 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RAB27AP51159 221 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms