RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 GABBR2O75899 941 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ATP2C1P98194 919 aaPredicted RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 SLC25A3Q00325 362 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 MLLT1Q03111 559 aaPredicted RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 SAMD4BQ5PRF9 694 aaKnown RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 CNSTQ6PJW8 725 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TBC1D21Q8IYX1 336 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 LMLNQ96KR4 655 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 HGH1Q9BTY7 390 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 KLHL28Q9NXS3 571 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TIMM8BQ9Y5J9 83 aaPredicted RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 NOX1Q9Y5S8 564 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 DPPA5A6NC42 116 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 IRF6O14896 467 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TRAPPC6AO75865 159 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 BMP10O95393 424 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 USP17L7P0C7H9 530 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ALDH4A1P30038 563 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 AP1S1P61966 158 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 CA9Q16790 459 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ZDHHC20Q5W0Z9 365 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PEX5LQ8IYB4 626 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 OR14C36Q8NHC7 312 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TPCN2Q8NHX9 752 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 FBXO25Q8TCJ0 367 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 MAFIPQ8WZ33 124 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ADAM2Q99965 735 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 MROH8Q9H579 483 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 GPRC5CQ9NQ84 441 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ADPRHL2Q9NX46 363 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 KIAA1257Q9ULG3 409 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 POFUT2Q9Y2G5 429 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 INMTO95050 263 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 FDPSP14324 419 aaKnown RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 TYMPP19971 482 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 NR4A1P22736 598 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 CD40LGP29965 261 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 POU6F1Q14863 301 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 SPDYCQ5MJ68 293 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 CRTC3Q6UUV7 619 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 FAM126BQ8IXS8 530 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TNFAIP8L1Q8WVP5 186 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TAMM41Q96BW9 452 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 MARK4Q96L34 752 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 POP1Q99575 1024 aaKnown RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PDGFCQ9NRA1 345 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 XPR1Q9UBH6 696 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ENTPD4Q9Y227 616 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 DHRS7Q9Y394 339 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PLEKHG1Q9ULL1 1385 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PLEKP08567 350 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 NFKB1P19838 968 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 CAPZA1P52907 286 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 NET1Q7Z628 596 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 CDYL2Q8N8U2 506 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 FICDQ9BVA6 458 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 PNPLA3Q9NST1 481 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 NDUFB10O96000 172 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 PTPN3P26045 913 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 RPA1P27694 616 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 NTSP30990 170 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 RAB11FIP2Q7L804 512 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 LPPQ93052 612 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 TBC1D10AQ9BXI6 508 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 SAR1AQ9NR31 198 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 MGRN1O60291 552 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ATP5BP06576 529 aaKnown RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 PTPN9P43378 593 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 DLG4P78352 724 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 CDK16Q00536 496 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 RIPK1Q13546 671 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 GRB14Q14449 540 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ZNF267Q14586 743 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 NAPEPLDQ6IQ20 393 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 DNAAF1Q8NEP3 725 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ATXN2LQ8WWM7 1075 aaKnown RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 VPS35Q96QK1 796 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 AIF1LQ9BQI0 150 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.18□□□□□ -0.621e-8■■■■□ 21.4
MSH6-201ENST00000234420 LRMDAQ9H2I8 198 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ATP5F1P24539 256 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 AFF1P51825 1210 aaKnown RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 DGKEP52429 567 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ERVK-9P63128 1117 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 MTAPQ13126 283 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 TFDP3Q5H9I0 405 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 DHDDSQ86SQ9 333 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 CCDC54Q8NEL0 328 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ZNF75CPQ92670 426 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 ERMAPQ96PL5 475 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 TM6SF2Q9BZW4 377 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 DPEP2Q9H4A9 486 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 GPATCH2LQ9NWQ4 482 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 WHRNQ9P202 907 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ERVK-11Q9UQG0 969 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 AP4B1Q9Y6B7 739 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms