RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ITPKBP27987 946 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 RPL14P50914 215 aaKnown RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 MPPE1Q53F39 396 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 WDR59Q6PJI9 974 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 UNC93AQ86WB7 457 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 DGCR6LQ9BY27 220 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 KCNN2Q9H2S1 579 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 DMGDHQ9UI17 866 aaKnown RBP13.34□□□□□ -0.27
COL1A1-201ENST00000225964 CORO2BQ9UQ03 480 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
COL1A1-201ENST00000225964 PSMD11O00231 422 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 IRF6O14896 467 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 PEX11AO75192 247 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 S100GP29377 79 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 BUD31P41223 144 aaPredicted RBP13.33□□□□□ -0.27
COL1A1-201ENST00000225964 CDC42P60953 191 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.27
COL1A1-201ENST00000225964 DGUOKQ16854 277 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 POMZP3Q6PJE2 187 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 TMPRSS6Q8IU80 811 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 RAVER1Q8IY67 606 aaKnown RBP13.33□□□□□ -0.27
COL1A1-201ENST00000225964 FAM98AQ8NCA5 519 aaKnown RBP13.33□□□□□ -0.27
COL1A1-201ENST00000225964 SEMA3CQ99985 751 aa13.33□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF214Q9UL59 606 aaPredicted RBP13.33□□□□□ -0.27
COL1A1-201ENST00000225964 FRMPD1Q5SYB0 1578 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 QSOX1O00391 747 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 PDE9AO76083 593 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 FGF19O95750 216 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 TFPIP10646 304 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 TNFSF9P41273 254 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 SPIBQ01892 262 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 GCNT7Q6ZNI0 430 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 COPG2Q9UBF2 871 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 A0A087X0B3 334 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 ASGR1P07306 291 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 GLRA2P23416 452 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 RCVRNP35243 200 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 PPM1AP35813 382 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 OR6K2Q8NGY2 324 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 LRRN4Q8WUT4 740 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 RIC1Q4ADV7 1423 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 MEGF6O75095 1541 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 A0A0A0MRY4 1105 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 HGFP14210 728 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 ME2P23368 584 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 ADSLP30566 484 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 CYP2C18P33260 490 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 SAMD4BQ5PRF9 694 aaKnown RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 NEK5Q6P3R8 708 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 KAT5Q92993 513 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 NARS2Q96I59 477 aaKnown RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 SPATA13Q96N96 652 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 RPS6KA6Q9UK32 745 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 MAPRE3Q9UPY8 281 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 ASNA1O43681 348 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 LRATO95237 230 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 MLYCDO95822 493 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 WASP42768 502 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 CRYBB1P53674 252 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 TAS2R41P59536 307 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 BNC1Q01954 994 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 SCIMPQ6UWF3 145 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 ZNF75CPQ92670 426 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.28
COL1A1-201ENST00000225964 PDCD10Q9BUL8 212 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 HIPK3Q9H422 1215 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 AP3M1Q9Y2T2 418 aa13.33□□□□□ -0.28
COL1A1-201ENST00000225964 LOC100506127A0A0U1RQW1 187 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CHADO15335 359 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 RASGRP1O95267 797 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CDC25CP30307 473 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 KLHL12Q53G59 568 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 PHYKPLQ8IUZ5 450 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 MCEMP1Q8IX19 187 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 SLC25A23Q9BV35 468 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 AGO1Q9UL18 857 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 E7ENQ6 273 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 TPP2P29144 1249 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 IDH2P48735 452 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 AADACL2Q6P093 401 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 CFAP52Q8N1V2 620 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 HNRNPLLQ8WVV9 542 aaKnown RBP13.32□□□□□ -0.28
COL1A1-201ENST00000225964 MPP4Q96JB8 637 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 FNDC11Q9BVV2 318 aa13.32□□□□□ -0.28
COL1A1-201ENST00000225964 ALKBH4Q9NXW9 302 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms