RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SNX32Q86XE0 403 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 XYLT1Q86Y38 959 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 ZC4H2Q9NQZ6 224 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 UBOX5O94941 541 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 LILRA4P59901 499 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 TMEM63BQ5T3F8 832 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 ANKRD49Q8WVL7 239 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 ZNF75CPQ92670 426 aaPredicted RBP18.59■□□□□ 0.57
CLIP2-201ENST00000223398 QRFPRQ96P65 431 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 BTRCQ9Y297 605 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CPQQ9Y646 472 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CD3EAPO15446 510 aaKnown RBP18.59■□□□□ 0.57
CLIP2-201ENST00000223398 MAGEC1O60732 1142 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 FYNP06241 537 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 NQO1P15559 274 aaKnown RBP18.59■□□□□ 0.57
CLIP2-201ENST00000223398 PCDH12Q9NPG4 1184 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 SNX6Q9UNH7 406 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 RWDD3Q9Y3V2 267 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 ZFP37Q9Y6Q3 630 aaPredicted RBP18.59■□□□□ 0.57
CLIP2-201ENST00000223398 MYBPHLA2RUH7 354 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 E9PAM4 449 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CXCR2P25025 360 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CLCN5P51795 746 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 IRF2BP2Q7Z5L9 587 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 SLC24A3Q9HC58 644 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 MORF4L1Q9UBU8 362 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CD84Q9UIB8 345 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CCL5P13501 91 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 VHLP40337 213 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 POLNQ7Z5Q5 900 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 KREMEN2Q8NCW0 462 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 OXNAD1Q96HP4 312 aaPredicted RBP18.58■□□□□ 0.57
CLIP2-201ENST00000223398 WRAP53Q9BUR4 548 aaKnown RBP18.58■□□□□ 0.57
CLIP2-201ENST00000223398 H3BN98 237 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 PCCBP05166 539 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 PSMA3P25788 255 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 FEN1P39748 380 aaKnown RBP18.58■□□□□ 0.57
CLIP2-201ENST00000223398 PRKAA2P54646 552 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 PMF1Q6P1K2 205 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 CDYL2Q8N8U2 506 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 GDF3Q9NR23 364 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 CLIC5Q9NZA1 410 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 SLC27A6Q9Y2P4 619 aa18.58■□□□□ 0.57
CLIP2-201ENST00000223398 RGS5O15539 181 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 DEAF1O75398 565 aaPredicted RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 LMO2P25791 158 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 CDK7P50613 346 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 ERVK-21P61565 698 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 CERCAMQ5T4B2 595 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 RHBDF2Q6PJF5 856 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 DQX1Q8TE96 717 aaKnown RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 STARD13Q9Y3M8 1113 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 PRR23D1E9PI22 279 aaPredicted RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 H3BQF6 201 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 PRR23D2P0DMB1 279 aaPredicted RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 RPL14P50914 215 aaKnown RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 ILF2Q12905 390 aaKnown RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 FAM98BQ52LJ0 330 aaKnown RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 C12orf56Q8IXR9 622 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 RAVER1Q8IY67 606 aaKnown RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 DPP10Q8N608 796 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 LINGO1Q96FE5 620 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 LPIN3Q9BQK8 851 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 ZSCAN32Q9NX65 697 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 SRRDQ9UH36 339 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 PSME2Q9UL46 239 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 OR10H1Q9Y4A9 318 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 SNX10Q9Y5X0 201 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 ERAL1O75616 437 aaKnown RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 ITGAVP06756 1048 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 PABPC1P11940 636 aaKnown RBP18.58■□□□□ 0.56
CLIP2-201ENST00000223398 DSG1Q02413 1049 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 RNF145Q96MT1 663 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 INVSQ9Y283 1065 aa18.58■□□□□ 0.56
CLIP2-201ENST00000223398 HS6ST1O60243 411 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 SERPINB3P29508 390 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 TYW3Q6IPR3 259 aaKnown RBP18.57■□□□□ 0.56
CLIP2-201ENST00000223398 ZBTB49Q6ZSB9 765 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 TMEM26Q6ZUK4 368 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 DSELQ8IZU8 1212 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 LHX5Q9H2C1 402 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 CIDEBQ9UHD4 219 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 CHURC1-FNTBB4DL54 471 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 FGF1P05230 155 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 IL5RAQ01344 420 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 UBXN2BQ14CS0 331 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 CPSF6Q16630 551 aaKnown RBP eCLIP18.57■□□□□ 0.56
CLIP2-201ENST00000223398 HOMEZQ8IX15 550 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 PRELID2Q8N945 189 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 ZSCAN18Q8TBC5 510 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-201ENST00000223398 ADPRHL2Q9NX46 363 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 EPN2O95208 641 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 GNA13Q14344 377 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 KYAT3Q6YP21 454 aaKnown RBP18.57■□□□□ 0.56
CLIP2-201ENST00000223398 UBE2E3Q969T4 207 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 KCTD15Q96SI1 283 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-201ENST00000223398 ATP6V1HQ9UI12 483 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 SYN3O14994 580 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 ARHGAP17Q68EM7 881 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 AMIGO3Q86WK7 504 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms