RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 APOL3O95236 402 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 ZNF730Q6ZMV8 503 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 RTL4Q6ZR62 310 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 SPAG16Q8N0X2 631 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 TESCQ96BS2 214 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 FAIM2Q9BWQ8 316 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 OR1I1O60431 355 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 HNF4AP41235 474 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 GXYLT1Q4G148 440 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 ZFP28Q8NHY6 868 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 PRAMEF33A0A0G2JMD5 474 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 TPP1O14773 563 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 PRAMEF10O60809 474 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 ETS2P15036 469 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 RPA3P35244 121 aaPredicted RBP14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 BCL2L1Q07817 233 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 SLC25A25Q6KCM7 469 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 SNX20Q7Z614 316 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 GALNT5Q7Z7M9 940 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 GPALPP1Q8IXQ4 340 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 SPERTQ8NA61 448 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 SRFBP1Q8NEF9 429 aaKnown RBP14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 LPAR1Q92633 364 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 SLC25A23Q9BV35 468 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 ZNF639Q9UID6 485 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 IKZF2Q9UKS7 526 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 RAB23Q9ULC3 237 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 PRELID1Q9Y255 219 aa14.72□□□□□ -0.05
SPTLC2-201ENST00000216484 H0Y858 1186 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 FFAR3O14843 346 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 GPR42O15529 346 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 LRATO95237 230 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 SPESP1Q6UW49 350 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 ZDHHC6Q9H6R6 413 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 DNMT1P26358 1616 aaKnown RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 H3BM21 787 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 VAPBO95292 243 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 CDH17Q12864 832 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 AADACL4Q5VUY2 407 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 RAD9BQ6WBX8 426 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 SLC41A1Q8IVJ1 513 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 PTCD3Q96EY7 689 aaKnown RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 ELAC1Q9H777 363 aaKnown RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 C5orf51A6NDU8 294 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 UGT2B17O75795 530 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 CCNB2O95067 398 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 SNRPB2P08579 225 aaKnown RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 POLR2EP19388 210 aaKnown RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 ASMTP46597 345 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 OLR1P78380 273 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 SMIM5Q71RC9 77 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 GORASP1Q9BQQ3 440 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 ZNF471Q9BX82 626 aaPredicted RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 FBXO44Q9H4M3 255 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 ZNF180Q9UJW8 692 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 SNAP23O00161 211 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 SLC26A4O43511 780 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 NR2F6P10588 404 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 TUBP50607 506 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 RPL6Q02878 288 aaKnown RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 CARTPTQ16568 116 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 TMPRSS11AQ6ZMR5 421 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 TC2NQ8N9U0 490 aa14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 GNEQ9Y223 722 aaKnown RBP14.71□□□□□ -0.05
SPTLC2-201ENST00000216484 OR2AT4A6NND4 320 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 ALOX5P09917 674 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 CDH4P55283 916 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 RAB43Q86YS6 212 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 ENGASEQ8NFI3 743 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 CEP295NLQ96MC4 621 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 MED11Q9P086 117 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 AFDNP55196 1824 aaKnown RBP14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 CFAP74Q9C0B2 1584 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 IGSF6O95976 241 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 HLFQ16534 295 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 ZNF554Q86TJ5 538 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 GLT1D1Q96MS3 346 aa14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 POP1Q99575 1024 aaKnown RBP14.71□□□□□ -0.06
SPTLC2-201ENST00000216484 OPLAHO14841 1288 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 PGAM1P18669 254 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 MAFIPQ8WZ33 124 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 CGRRF1Q99675 332 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 EIF3KQ9UBQ5 218 aaKnown RBP14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 ABCG2Q9UNQ0 655 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 URADA6NGE7 173 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 FAM86B1E9PN63 330 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 ENPEPQ07075 957 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 TDRPQ86YL5 185 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 C10orf107Q8IVU9 208 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 ZNF366Q8N895 744 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 RXFP2Q8WXD0 754 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 ATXN3LQ9H3M9 355 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 CLK4Q9HAZ1 481 aaKnown RBP14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 CDHR5Q9HBB8 845 aa14.7□□□□□ -0.06
SPTLC2-201ENST00000216484 SDK1Q7Z5N4 2213 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms