RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TMIGD2Q96BF3 282 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 TRAPPC9Q96Q05 1148 aa15.23■□□□□ 0.03
EFNB1-201ENST00000204961 H3BNX3 289 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 MATN2O00339 956 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 TIMM44O43615 452 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 HARS2P49590 506 aaKnown RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 PPP1R8Q12972 351 aaKnown RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 TMCO4Q5TGY1 634 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 ITPRIPL1Q6GPH6 555 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 NEPROQ6NW34 567 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 TIFABQ6ZNK6 161 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 CHST15Q7LFX5 561 aaPredicted RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 NSUN5Q96P11 429 aaKnown RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 DCUN1D5Q9BTE7 237 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 SPATA16Q9BXB7 569 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 GBA3Q9H227 469 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 AGO3Q9H9G7 860 aaKnown RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 VCX3AQ9NNX9 186 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 DNAJC28Q9NX36 388 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 PLOD1Q02809 727 aaPredicted RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 SLC10A7Q0GE19 358 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 RPS6KA2Q15349 733 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 TMEM259Q4ZIN3 620 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 TMEM135Q86UB9 458 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 LSMEM2Q8N112 164 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 TTC39CQ8N584 583 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 TTC9BQ8N6N2 239 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 IFT43Q96FT9 208 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 MRPL1Q9BYD6 325 aaKnown RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 NFKBIZQ9BYH8 718 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 FAM96AQ9H5X1 160 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 RAP2CQ9Y3L5 183 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 ARL5CA6NH57 179 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 GPR39O43194 453 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 GRIA3P42263 894 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 MAGEA6P43360 314 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 CDK7P50613 346 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 ARSDP51689 593 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 PLEKHH3Q7Z736 793 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 DRAXINQ8NBI3 349 aaPredicted RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 PPHLN1Q8NEY8 458 aaKnown RBP15.22■□□□□ 0.03
EFNB1-201ENST00000204961 ACMSDQ8TDX5 336 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 HIC2Q96JB3 615 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 NOD1Q9Y239 953 aa15.22■□□□□ 0.03
EFNB1-201ENST00000204961 A8MX80 341 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 H3BSA7 217 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 M0QZ92 97 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 TADA2AO75478 443 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 MLNP12872 115 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 ME2P23368 584 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 GGT5P36269 586 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 CSE1LP55060 971 aaKnown RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 MTTPP55157 894 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 WNT3AP56704 352 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 USP46P62068 366 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 FASTKQ14296 549 aaKnown RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 PSMD5Q16401 504 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 TRIML2Q8N7C3 387 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 PTPN18Q99952 460 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 NAT9Q9BTE0 207 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 MARCH4Q9P2E8 410 aaPredicted RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 IGSF9Q9P2J2 1179 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 HAPLN1P10915 354 aaPredicted RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 PPARGP37231 505 aaPredicted RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 CHN2P52757 468 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 RAB10P61026 200 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 PSME3P61289 254 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 PPIDQ08752 370 aaKnown RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 DYNC1I2Q13409 638 aaKnown RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 PFKFB4Q16877 469 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 VPS26BQ4G0F5 336 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 NADK2Q4G0N4 442 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 SLC39A12Q504Y0 691 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 RARS2Q5T160 578 aaKnown RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 LCA5Q86VQ0 697 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 ATAD1Q8NBU5 361 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 LPGAT1Q92604 370 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 TBATAQ96M53 351 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 SERPINI1Q99574 410 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 IL22Q9GZX6 179 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 COQ10BQ9H8M1 238 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 EFCAB1Q9HAE3 211 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 SEMA4BQ9NPR2 832 aaPredicted RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 CASS4Q9NQ75 786 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 FAM105AQ9NUU6 356 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 IPO11Q9UI26 975 aaKnown RBP15.21■□□□□ 0.03
EFNB1-201ENST00000204961 PPP2R3BQ9Y5P8 575 aa15.21■□□□□ 0.03
EFNB1-201ENST00000204961 C17orf102A2RUQ5 167 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 NT5C1B-RDH14C9J2C7 533 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 CRCPO75575 148 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 LINC00032P0C843 101 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 NCK1P16333 377 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 SLC7A2P52569 658 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 KRT80Q6KB66 452 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 LRRC43Q8N309 656 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 OR10T2Q8NGX3 314 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 DNAJB14Q8TBM8 379 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 C1orf50Q9BV19 199 aa15.2■□□□□ 0.02
EFNB1-201ENST00000204961 OSBPL2Q9H1P3 480 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms