RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Upf1Q9EPU0 1124 aaKnown RBP6.34□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tdp2Q9JJX7 370 aa6.34□□□□□ -1.4
Lig4-202ENSMUST00000170033 CasrQ9QY96 1079 aa6.34□□□□□ -1.4
Lig4-202ENSMUST00000170033 Hic1Q9R1Y5 733 aa6.34□□□□□ -1.4
Lig4-202ENSMUST00000170033 S1pr4Q9Z0L1 386 aa6.34□□□□□ -1.4
Lig4-202ENSMUST00000170033 Arhgef37A1IGU4 676 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ccnyl1D3YUJ3 367 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Zc3h7aE9PWW6 970 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 E230025N22RikG5E8S3 482 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Smad7O35253 426 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 InvsO89019 1062 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 P01652 108 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Chrnb1P09690 501 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gria2P23819 883 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Crhr1P35347 415 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 SykP48025 629 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ccr5P51682 354 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Plk2P53351 682 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Abce1P61222 599 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 NficP70255 439 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Nrp1P97333 923 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Polr2cP97760 275 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 PrkcqQ02111 707 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Lrrc74bQ14BP6 391 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 HexdcQ3U4H6 486 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mxd4Q60948 209 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tll1Q62381 1013 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tatdn1Q6P8M1 295 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gabbr2Q80T41 940 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Fndc11Q80WB0 326 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Fzd10Q8BKG4 582 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 ReltQ8BX43 436 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Adgra1Q8C4G9 578 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Wdr27Q8C5V5 780 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Q8CCC3 530 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cox10Q8CFY5 443 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Trim61Q8JZK6 461 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Zbtb6Q8K088 423 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mrpl47Q8K2Y7 252 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Smyd2Q8R5A0 433 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Clptm1Q8VBZ3 664 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Zfp566Q8VCI1 386 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ttc39cQ8VE09 580 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Pofut2Q8VHI3 429 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 GneQ91WG8 722 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Lrp8Q924X6 996 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 LiasQ99M04 373 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Zmat5Q9CQR5 170 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 PollQ9QXE2 573 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 MthfrQ9WU20 654 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Rtl9Q32KG4 1339 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Trbv4A0A075B5I2 113 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 A630010A05RikA9C473 232 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 5830411N06RikB3F5L4 1112 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Atp6ap1lD3Z5W0 336 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm5415E9PXF3 478 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm7694J3QNH8 270 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Vmn2r5K7N788 911 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Galnt4O08832 578 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Banf1O54962 89 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Prf1P10820 554 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Scd1P13516 355 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 ItgalP24063 1163 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 SftpbP50405 377 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Sult2a1P52843 285 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Nrg2P56974 756 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Clec4fP70194 548 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Rplp2P99027 115 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 SelpQ01102 768 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mettl17Q3U2U7 461 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm732Q3V0P9 516 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Myo1gQ5SUA5 1024 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 9930111J21Rik1Q5SVP0 844 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cpa6Q5U901 438 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Sort1Q6PHU5 825 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Zfp759Q7M6X3 721 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Trnau1apQ80VC6 287 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Sema3dQ8BH34 777 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 4933402J07RikQ8BHX0 270 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Clptm1lQ8BXA5 539 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ptcd2Q8R3K3 381 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Olfr809Q8VEX8 328 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Pth2rQ91V95 546 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Golm1Q91XA2 393 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 GrhprQ91Z53 328 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 PigxQ99LV7 254 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Neurl2Q9D0S4 285 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Polr3hQ9D2C6 204 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Apbb2Q9DBR4 760 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 EtfbQ9DCW4 255 aaKnown RBP6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Abhd1Q9QZC8 412 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tnni1Q9WUZ5 187 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Efcab12V9GXH0 673 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Plxnb3Q9QY40 1902 aa6.33□□□□□ -1.4
Lig4-202ENSMUST00000170033 Olfr1160A2AVT0 319 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Skint11A7XV14 364 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Esp31A8R0W3 114 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Zfp990B1AVN5 605 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Taf4E9QAP7 1042 aaKnown RBP6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Dcdc2bF7BCK0 340 aa6.32□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms