RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 HltfQ6PCN7 1003 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Reps2Q80XA6 521 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 LppQ8BFW7 613 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Best2Q8BGM5 508 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmem209Q8BRG8 561 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nmur2Q8BZ39 395 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sfrp1Q8C4U3 314 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vps11Q91W86 941 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Kif19Q99PT9 997 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr711Q9EPG2 314 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Morf4l2Q9R0Q4 288 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Shroom3Q9QXN0 1986 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn2r74E9PW21 853 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 FancfE9Q5Z5 343 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Herc6F2Z461 1003 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 TpteG5E8H5 664 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cyp27b1O35084 507 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ap2a2P17427 938 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Six4Q61321 775 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sez6lQ6P1D5 963 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cyp2d40Q6P8N9 338 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fam120bQ6RI63 786 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rslcan18Q7M6X5 460 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tas2r129Q7M709 320 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Snx17Q8BVL3 470 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slc47a1Q8K0H1 567 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 GrpQ8R1I2 146 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tbc1d19Q8VDV7 526 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zfp617Q91WM0 559 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sult5a1Q91X36 291 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sec16bQ91XT4 1051 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 MydgfQ9CPT4 166 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 PclafQ9CQX4 110 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 CenpsQ9D084 142 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmem86aQ9D8N3 241 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Mrpl17Q9D8P4 176 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Timp4Q9JHB3 224 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rnf11Q9QYK7 154 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Abhd1Q9QZC8 412 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f15A0A087WR44 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f12A0A0A0MQP3 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ccdc120A2AEV7 629 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f9A2BFZ7 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f7A2BHG6 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f19A2CG71 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f10A2CG92 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f3A2CGC2 496 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f13B8JKF6 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 C7D3YXF5 845 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f2J3QMS5 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f25J3QMV9 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f6J3QMW9 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f26J3QNK2 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f24J3QNQ5 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f8J3QQ50 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm3383J3QQ59 259 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f17L7MU81 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f18L7MU83 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm3164L7N2B9 238 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm3239L7N2D9 227 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sema6aO35464 1031 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Adra2bP30545 450 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sephs2P97364 452 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f14Q1LZI5 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rnf157Q3TEL6 685 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Parp3Q3ULW8 533 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btbd35f27Q5FWA1 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Msi1Q61474 362 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pcbp2Q61990 362 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sytl5Q80T23 753 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pcid2Q8BFV2 399 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ddx18Q8K363 660 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sytl2Q99N50 950 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 GMCL1P1Q99N64 498 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hormad1Q9D5T7 392 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cdh13Q9WTR5 714 aa9.88□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Klhdc7bA0A286YD60 1263 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 CercamA3KGW5 592 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Phf11A6H5X4 337 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr596F8VQ26 312 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn2r5K7N788 911 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn2r61L7N2B8 865 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pde9aO70628 534 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ctbp1O88712 441 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Man1a1P45700 655 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pik3r6Q3U6Q4 756 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ankrd13bQ5F259 626 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr8Q60892 310 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rfx4Q7TNK1 735 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Castor2Q8CAB8 329 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Q8CCC3 530 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tp53bp2Q8CG79 1128 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Wdr11Q8K1X1 1223 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Smim11aQ99J19 55 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Elp3Q9CZX0 547 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Il18rapQ9Z2B1 614 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm43518A0A0G2JGB6 165 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn1r3A2AMT7 306 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 4930426L09RikE9Q0N7 123 aa9.87□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 MrasO08989 208 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms