RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tmem121Q80XA0 318 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Psip1Q99JF8 528 aaKnown RBP16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Hacd2Q9D3B1 254 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Cdh22Q9WTP5 813 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Arid3bQ9Z1N7 568 aa16.59■□□□□ 0.25
Shh-201ENSMUST00000002708 Rhox3fA2ANE1 215 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn2r24D3YUI0 854 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Cldn5O54942 218 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 En2P09066 324 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Sipa1P46062 1037 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Eml1Q05BC3 814 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 AcadsQ07417 412 aaKnown RBP16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Eps8Q08509 821 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm5431Q5NCB3 844 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Smarcd1Q61466 515 aaKnown RBP16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm5414Q6IFZ8 552 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Deup1Q7M6Y5 601 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 ClyblQ8R4N0 338 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 B4galt4Q9JJ04 344 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Scamp5Q9JKD3 235 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Rnf11Q9QYK7 154 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 CdylQ9WTK2 593 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Psmd13Q9WVJ2 376 aa16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Celf2Q9Z0H4 508 aaKnown RBP16.58■□□□□ 0.25
Shh-201ENSMUST00000002708 Cacna1cQ01815 2139 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr1023A2ASU6 311 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm21293E9Q4G9 266 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Herc6F2Z461 1003 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Mthfd2P18155 350 aaKnown RBP16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Msr1P30204 458 aaKnown RBP16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Brcc3P46737 291 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Fitm2P59266 262 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr463Q5SW49 311 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr462Q5SW50 311 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Fastkd1Q6DI86 829 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Kcng4Q80XM3 506 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Gxylt2Q810K9 444 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Sik2Q8CFH6 931 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 ClmpQ8R373 373 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr532Q8VGT4 309 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Sec16bQ91XT4 1051 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Clca1Q9D7Z6 913 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Mrpl17Q9D8P4 176 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Ddx59Q9DBN9 619 aa16.58■□□□□ 0.24
Shh-201ENSMUST00000002708 Zbed5B2RPU8 756 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm6133B2RY53 190 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Ap1g1P22892 822 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 ZfaP23607 742 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Htr4P97288 388 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Pld2P97813 933 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Fam160a1Q505K2 1081 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Pcbp2Q61990 362 aaKnown RBP16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Podnl1Q6P3Y9 559 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Cd300aQ6SJQ0 318 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Hsfy2Q80Y37 392 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Ccdc90bQ8C3X2 256 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Acsf2Q8VCW8 615 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Ppa2Q91VM9 330 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Gprc5bQ923Z0 410 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Tcf7l2Q924A0 459 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Rnf31Q924T7 1066 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Prpf19Q99KP6 504 aaKnown RBP16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Tmem114Q9D563 222 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Zbtb12Q9Z150 459 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Ddx39bQ9Z1N5 428 aaKnown RBP16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Zfp963D3Z2T8 383 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm43302L7N1X8 611 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 PdgfrbP05622 1098 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Gbp10Q000W5 611 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Itga4Q00651 1039 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 SPINDOCQ05AH6 381 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Foxred2Q3USW5 665 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Sgpl1Q8R0X7 568 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Nipsnap3bQ9CQE1 247 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Wdr89Q9D0R9 386 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Cib1Q9Z0F4 191 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Wdr81Q5ND34 1934 aa16.57■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm43951A0A0N4SUT6 962 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm45713A0A1B0GS68 446 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm12800B1AUV4 484 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Grip2G3XA20 1042 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm12794L7MTS5 483 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Sbk3P0C5K0 361 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Cd72P21855 354 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 PenkP22005 268 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 DesP31001 469 aaKnown RBP16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Smpd1Q04519 627 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Snx21Q3UR97 363 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Lag3Q61790 521 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 TiparpQ8C1B2 657 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 LipmQ8K2A6 422 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Q9D979 236 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Akr1e2Q9DCT1 301 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr711Q9EPG2 314 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm28168A0A087WNP1 180 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm5930D3Z257 264 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Sema3aO08665 772 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 P01652 108 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 AldoaP05064 364 aaKnown RBP16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 B3gat3P58158 335 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 75.9 ms