RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 AP3B1O00203 1094 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 KPNA3O00505 521 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-218ENST00000641491 ALOX15BO15296 676 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 TTI1O43156 1089 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 SMAD6O43541 496 aaKnown RBP13.12□□□□□ -0.31
PHGDH-218ENST00000641491 IL1BP01584 269 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 DNTTP04053 509 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
PHGDH-218ENST00000641491 PSMB4P28070 264 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 CCNHP51946 323 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-218ENST00000641491 GDF10P55107 478 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 MPP3Q13368 585 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 CCINQ13939 588 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 CYTH1Q15438 398 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 PCSK7Q16549 785 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 PTPRNQ16849 979 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 MYLK3Q32MK0 819 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 ZNF776Q68DI1 518 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-218ENST00000641491 TTC27Q6P3X3 843 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 LINC00523Q86TU6 105 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 MMGT1Q8N4V1 131 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 ZNF366Q8N895 744 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 OR6K2Q8NGY2 324 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 SLCO2A1Q92959 643 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 RTP4Q96DX8 246 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 SNF8Q96H20 258 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 LRIG1Q96JA1 1093 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 LRRC40Q9H9A6 602 aa13.12□□□□□ -0.31
PHGDH-218ENST00000641491 FBRSL1Q9HCM7 1045 aaKnown RBP13.12□□□□□ -0.31
PHGDH-218ENST00000641491 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-218ENST00000641491 ERI2A8K979 691 aaKnown RBP13.11□□□□□ -0.31
PHGDH-218ENST00000641491 SMAPO00193 183 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 RAD51CO43502 376 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 SIN3BO75182 1162 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 PMPCBO75439 489 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
PHGDH-218ENST00000641491 ADH1BP00325 375 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 APRTP07741 180 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 PRKCHP24723 683 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 MCM3P25205 808 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 KIR2DL1P43626 348 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-218ENST00000641491 PSMD8P48556 350 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 CSNK1DP48730 415 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 DGKEP52429 567 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
PHGDH-218ENST00000641491 DSC2Q02487 901 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 ARMC12Q5T9G4 340 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 EMC10Q5UCC4 262 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 NAPEPLDQ6IQ20 393 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 KIAA1324Q6UXG2 1013 aaKnown RBP13.11□□□□□ -0.31
PHGDH-218ENST00000641491 DPY19L3Q6ZPD9 716 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 PLPP6Q8IY26 295 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 DNAAF3Q8N9W5 541 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-218ENST00000641491 RMDN1Q96DB5 314 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 MRGPRX3Q96LB0 322 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 FCRL5Q96RD9 977 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.314e-7■■■□□ 17.3
PHGDH-218ENST00000641491 USP29Q9HBJ7 922 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 ZDHHC4Q9NPG8 344 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 LHX3Q9UBR4 397 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 MMP17Q9ULZ9 603 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 NCKAP1Q9Y2A7 1128 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 ATP8A1Q9Y2Q0 1164 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 ACTL7AQ9Y615 435 aa13.11□□□□□ -0.31
PHGDH-218ENST00000641491 FAM186AA6NE01 2351 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 NEMP1O14524 444 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 SOCS5O75159 536 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 CPP00450 1065 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 UGT2B4P06133 528 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 RHOXF2BP0C7M4 288 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 CHRNB1P11230 501 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 MESP2Q0VG99 397 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 HLTFQ14527 1009 aaKnown RBP eCLIP13.1□□□□□ -0.31
PHGDH-218ENST00000641491 FAXCQ5TGI0 409 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 IZUMO3Q5VZ72 239 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 ERAP2Q6P179 960 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 GDPD4Q6W3E5 623 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 SFTPA1Q8IWL2 248 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 PPIL6Q8IXY8 311 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 IFT20Q8IY31 132 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 STK40Q8N2I9 435 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 FBXL6Q8N531 539 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 IL17RCQ8NAC3 791 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 OR2T3Q8NH03 318 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 ERLEC1Q96DZ1 483 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 MYO19Q96H55 970 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 ZNF641Q96N77 438 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-218ENST00000641491 GABRG3Q99928 467 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 OMDQ99983 421 aa13.1□□□□□ -0.31
PHGDH-218ENST00000641491 RHOXF2Q9BQY4 288 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms