RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 GOT1P17174 413 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 MSX2P35548 267 aaPredicted RBP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 DGCR14Q96DF8 476 aaKnown RBP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 WDR18Q9BV38 432 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 CLN6Q9NWW5 311 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 CLUHO75153 1309 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 CYP3A7-CYP3A51PA0A087WV96 503 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 FGF10O15520 208 aaPredicted RBP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 MLYCDO95822 493 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 LINC00032P0C843 101 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 WARSP23381 471 aaKnown RBP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 CYP3A7P24462 503 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 LACTB2Q53H82 288 aaPredicted RBP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ARMC12Q5T9G4 340 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 KRT77Q7Z794 578 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 LRRC4CQ9HCJ2 640 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ZFP14Q9HCL3 533 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 NKRFO15226 690 aaKnown RBP eCLIP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 OR6B1O95007 311 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 MTA1Q13330 715 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF410Q86VK4 478 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 S100ZQ8WXG8 99 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 LGMNQ99538 433 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ABCC13Q9NSE7 274 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ATXN10Q9UBB4 475 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 IGSF6O95976 241 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 CCNB1P14635 433 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF846Q147U1 533 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 PACS1Q6VY07 963 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 PIWIL4Q7Z3Z4 852 aaKnown RBP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF670Q9BS34 389 aa18.65■□□□□ 0.58
SCARB2-213ENST00000638680 MTIF3Q9H2K0 278 aaKnown RBP18.65■□□□□ 0.58
SCARB2-213ENST00000638680 ATP6AP2A0A1C7CYW4 349 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 ATP6AP2O75787 350 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 PTPN1P18031 435 aaKnown RBP18.64■□□□□ 0.58
SCARB2-213ENST00000638680 CNTN2Q02246 1040 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 ZFPM1Q8IX07 1006 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 KBTBD8Q8NFY9 601 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 VPS35Q96QK1 796 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 CCDC3Q9BQI4 270 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.64■□□□□ 0.584e-8■■■■■ 28.1
SCARB2-213ENST00000638680 LYVE1Q9Y5Y7 322 aa18.64■□□□□ 0.58
SCARB2-213ENST00000638680 AGRPO00253 132 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 NFASCO94856 1347 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 SLC26A3P40879 764 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 TNFSF9P41273 254 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 RPL38P63173 70 aaKnown RBP18.64■□□□□ 0.57
SCARB2-213ENST00000638680 ACOX1Q15067 660 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 PYDC2Q56P42 97 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 SLC9A9Q8IVB4 645 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 PQLC1Q8N2U9 271 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 BPGMP07738 259 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 CDH3P22223 829 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 AXLP30530 894 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 ECM1Q16610 540 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 IKBIPQ70UQ0 350 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 CLNKQ7Z7G1 428 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 CAB39LQ9H9S4 337 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 TNS2Q63HR2 1409 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 UMODL1Q5DID0 1318 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 MOXD2PA6NHM9 499 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 PCDH8O95206 1070 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 CYP20A1Q6UW02 462 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 CLPTM1LQ96KA5 538 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 SNX6Q9UNH7 406 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 MEIS2O14770 477 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 LCA5LO95447 670 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 CTBP1Q13363 440 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 FNBP1LQ5T0N5 605 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 FAM171A1Q5VUB5 890 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 ECHDC2Q86YB7 292 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 ZC3H7AQ8IWR0 971 aaKnown RBP18.64■□□□□ 0.57
SCARB2-213ENST00000638680 OSBPL6Q9BZF3 934 aa18.64■□□□□ 0.57
SCARB2-213ENST00000638680 ZBTB11O95625 1053 aaPredicted RBP18.63■□□□□ 0.57
SCARB2-213ENST00000638680 IL12AP29459 219 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 RAB27AP51159 221 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 CDYL2Q8N8U2 506 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 PRDM12Q9H4Q4 367 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 JCADQ9P266 1359 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 DCDC2CA8MYV0 355 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 CBFA2T3O75081 653 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 RECQL4O94761 1208 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 ANXA5P08758 320 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 ITGAXP20702 1163 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 UNC93AQ86WB7 457 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 TMCO1Q9UM00 188 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 PAPSS1O43252 624 aaPredicted RBP18.63■□□□□ 0.57
SCARB2-213ENST00000638680 PTPN3P26045 913 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 INTS11Q5TA45 600 aaKnown RBP18.63■□□□□ 0.57
SCARB2-213ENST00000638680 CMC1Q7Z7K0 106 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 FAM47BQ8NA70 645 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 PPP1R14AQ96A00 147 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 POLE3Q9NRF9 147 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 WNT7AO00755 349 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 RTN3O95197 1032 aaPredicted RBP18.63■□□□□ 0.57
SCARB2-213ENST00000638680 SLC7A2P52569 658 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 OAZ1P54368 228 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 BNIP1Q12981 228 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 ZNF554Q86TJ5 538 aa18.63■□□□□ 0.57
SCARB2-213ENST00000638680 VGLL2Q8N8G2 317 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms