RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ZBED6P86452 979 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 PARP15Q460N3 678 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 NEK5Q6P3R8 708 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 RFX8Q6ZV50 586 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 KANSL1Q7Z3B3 1105 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 PLPP6Q8IY26 295 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 EID2Q8N6I1 236 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 KLHDC7BQ96G42 594 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 GDAP1L1Q96MZ0 367 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 ZWILCHQ9H900 591 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 CWC15Q9P013 229 aaKnown RBP17.98■□□□□ 0.47
PNKP-230ENST00000638016 MSRB2Q9Y3D2 182 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 SCINQ9Y6U3 715 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 LRRK1Q38SD2 2015 aa17.98■□□□□ 0.47
PNKP-230ENST00000638016 CXorf51AA0A1B0GTR3 108 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 POM121BA6NF01 834 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 ZSCAN5CA6NGD5 496 aaPredicted RBP17.97■□□□□ 0.47
PNKP-230ENST00000638016 IGLON5A6NGN9 336 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 SERPING1P05155 500 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 PROS1P07225 676 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 MYBL1P10243 752 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 AKT2P31751 481 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 PAPOLAP51003 745 aaKnown RBP17.97■□□□□ 0.47
PNKP-230ENST00000638016 DNAJC3Q13217 504 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 NFKBIBQ15653 356 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 ZNF542PQ5EBM4 170 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 TPRG1LQ5T0D9 272 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 GDPD4Q6W3E5 623 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 IQCHQ86VS3 1027 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 BMFQ96LC9 184 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 CDC6Q99741 560 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 CALN1Q9BXU9 219 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 SLC17A9Q9BYT1 436 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 UBA2Q9UBT2 640 aaPredicted RBP17.97■□□□□ 0.47
PNKP-230ENST00000638016 FTSJ1Q9UET6 329 aa17.97■□□□□ 0.47
PNKP-230ENST00000638016 APOBEC2Q9Y235 224 aaKnown RBP17.97■□□□□ 0.47
PNKP-230ENST00000638016 COL5A1P20908 1838 aaPredicted RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 DFNA5O60443 496 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 PRAMEF11O60813 436 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 DKK1O94907 266 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 TRIM16O95361 564 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 POP4O95707 220 aaKnown RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 IGSF6O95976 241 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 NUDT1P36639 197 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 RXRGP48443 463 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 ARRB1P49407 418 aaPredicted RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 SEMG2Q02383 582 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 CCDC15Q0P6D6 951 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 DPYSQ14117 519 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 INO80DQ53TQ3 878 aaPredicted RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 AFMIDQ63HM1 303 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 PTAR1Q7Z6K3 402 aaPredicted RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 HSPH1Q92598 858 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 SYN2Q92777 582 aaPredicted RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 TRIM11Q96F44 468 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 NUP85Q9BW27 656 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 ERVMER34-1Q9H9K5 563 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 MRPL47Q9HD33 250 aaKnown RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 ETNK2Q9NVF9 386 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 UCKL1Q9NWZ5 548 aa17.96■□□□□ 0.47
PNKP-230ENST00000638016 LUC7L2Q9Y383 392 aaKnown RBP17.96■□□□□ 0.47
PNKP-230ENST00000638016 FAM149AA5PLN7 773 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 DFFAO00273 331 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 AREL1O15033 823 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 DAPK3O43293 454 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 TNFSF14O43557 240 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 AP1G1O43747 822 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 PRKCGP05129 697 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 AMPD1P23109 780 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 NDST2P52849 883 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 RPS21P63220 83 aaKnown RBP17.95■□□□□ 0.46
PNKP-230ENST00000638016 KIAA1161Q6NSJ0 714 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 DHRS13Q6UX07 377 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 Q6ZSR6 202 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 ABI3BPQ7Z7G0 1075 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 ZSWIM9Q86XI8 627 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 TSEN2Q8NCE0 465 aaKnown RBP17.95■□□□□ 0.46
PNKP-230ENST00000638016 RNF214Q8ND24 703 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 CNDP2Q96KP4 475 aaKnown RBP17.95■□□□□ 0.46
PNKP-230ENST00000638016 NSMCE3Q96MG7 304 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 KLF6Q99612 283 aaPredicted RBP17.95■□□□□ 0.46
PNKP-230ENST00000638016 PACSIN1Q9BY11 444 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 ANAPC7Q9UJX3 599 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 ZMIZ1Q9ULJ6 1067 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 NENFQ9UMX5 172 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 SHROOM3Q8TF72 1996 aa17.95■□□□□ 0.46
PNKP-230ENST00000638016 FREM2Q5SZK8 3169 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 TTC24A2A3L6 582 aaPredicted RBP17.94■□□□□ 0.46
PNKP-230ENST00000638016 NEMP1O14524 444 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 MUSKO15146 869 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 BUB1BO60566 1050 aaPredicted RBP17.94■□□□□ 0.46
PNKP-230ENST00000638016 MMP20O60882 483 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 RARAP10276 462 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 TIMP2P16035 220 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 HTR7P34969 479 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 OVGP1Q12889 678 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 CCDC122Q5T0U0 273 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 ALKBH5Q6P6C2 394 aaKnown RBP17.94■□□□□ 0.46
PNKP-230ENST00000638016 TTC7BQ86TV6 843 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 CASKIN2Q8WXE0 1202 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms