RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 MARVELD2Q8N4S9 558 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 CCNYL1Q8N7R7 359 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 TNIP2Q8NFZ5 429 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 CEP70Q8NHQ1 597 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 B4GALNT2Q8NHY0 566 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 SLC35F5Q8WV83 523 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 C17orf50Q8WW18 174 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 WNT8BQ93098 351 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 DCUN1D1Q96GG9 259 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 CNDP1Q96KN2 507 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PLEKHG4BQ96PX9 1271 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 NDNQ99608 321 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PHF7Q9BWX1 381 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 ACE2Q9BYF1 805 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 TRPV6Q9H1D0 765 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 RHOJQ9H4E5 214 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 EBF3Q9H4W6 596 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 WDR41Q9HAD4 459 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 COX16Q9P0S2 106 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 KIAA1522Q9P206 1035 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 FZD10Q9ULW2 581 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 N6AMT1Q9Y5N5 214 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 ZFP37Q9Y6Q3 630 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 HEATR9A2RTY3 570 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 ARVCFO00192 962 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 NEMP1O14524 444 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 NPHS1O60500 1241 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 UGT1A9O60656 530 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 GMNNO75496 209 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 MAP3K6O95382 1288 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PENKP01210 267 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 LGALS2P05162 132 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 RBP1P09455 135 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 ERVK-10P10266 1014 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 GOT1P17174 413 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 ARF4P18085 180 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 SAT1P21673 171 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 HTR7P34969 479 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 HCAR3P49019 387 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 IKBKEQ14164 716 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 SQLEQ14534 574 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PAFAH1B3Q15102 231 aaKnown RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 CA9Q16790 459 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 SAMD4BQ5PRF9 694 aaKnown RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 AGAP9Q5VTM2 703 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 NCBP2-AS2Q69YL0 99 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 LAIR1Q6GTX8 287 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 TMC7Q7Z402 723 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 DEFB106AQ8N104 65 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 FAM81AQ8TBF8 368 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 CENPIQ92674 756 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 NTAN1Q96AB6 310 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PPWD1Q96BP3 646 aaKnown RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PPP1R14BQ96C90 147 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 MOCOSQ96EN8 888 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PRR11Q96HE9 360 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 CPB2Q96IY4 423 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 ZNF668Q96K58 619 aaPredicted RBP4.03□□□□□ -1.76
SCN1A-214ENST00000637038 CDRT15Q96T59 188 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 OSBPL11Q9BXB4 747 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 MUC3BQ9H195 1237 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 UGT1A7Q9HAW7 530 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 UGT1A10Q9HAW8 530 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 UGT1A8Q9HAW9 530 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 SMYD2Q9NRG4 433 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 SLC38A7Q9NVC3 462 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 HMGXB4Q9UGU5 601 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 PCDHGA2Q9Y5H1 932 aa4.03□□□□□ -1.76
SCN1A-214ENST00000637038 LAMA3Q16787 3333 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 DENRO43583 198 aaKnown RBP4.02□□□□□ -1.77
SCN1A-214ENST00000637038 MFSD11O43934 449 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 CRCPO75575 148 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 AP1G2O75843 785 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 PIGNO95427 931 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 SFTPCP11686 197 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 FCGR1AP12314 374 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 IL10P22301 178 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 PEX2P28328 305 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 MLH1P40692 756 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 AQP4P55087 323 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 PFKPQ01813 784 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF33AQ06730 810 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 NME3Q13232 169 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 RPS6KA2Q15349 733 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 OGFRL1Q5TC84 451 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-214ENST00000637038 SH3PXD2AQ5TCZ1 1133 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 CNKSR3Q6P9H4 555 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 PGM2L1Q6PCE3 622 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 EFL1Q7Z2Z2 1120 aaKnown RBP4.02□□□□□ -1.77
SCN1A-214ENST00000637038 METTL23Q86XA0 190 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 ANKRD13BQ86YJ7 626 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 CROCCP3Q8IVE0 287 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 FBXO16Q8IX29 292 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-214ENST00000637038 RBM12BQ8IXT5 1001 aaKnown RBP4.02□□□□□ -1.77
SCN1A-214ENST00000637038 CRYBG2Q8N1P7 616 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 MPP5Q8N3R9 675 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 ATPAF2Q8N5M1 289 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 LZTR1Q8N653 840 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 CASP10Q92851 521 aa4.02□□□□□ -1.77
SCN1A-214ENST00000637038 ISL2Q96A47 359 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms