RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MARC1Q5VT66 337 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SDE2Q6IQ49 451 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 C22orf39Q6P5X5 142 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 DSG4Q86SJ6 1040 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 C17orf53Q8N3J3 647 aaPredicted RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF513Q8N8E2 541 aaPredicted RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 CCNYQ8ND76 341 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 OR7D4Q8NG98 312 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 OR2AP1Q8NGE2 309 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 OR52K2Q8NGK3 314 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 COG1Q8WTW3 980 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 HTR3CQ8WXA8 447 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 CLDN23Q96B33 292 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GDAP1L1Q96MZ0 367 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 IL12RB2Q99665 862 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GABRG3Q99928 467 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 MGME1Q9BQP7 344 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 CINPQ9BW66 212 aaPredicted RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 HEMGNQ9BXL5 484 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 CIPCQ9C0C6 399 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SLC39A8Q9C0K1 460 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 POLR1EQ9GZS1 481 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 CHRDQ9H2X0 955 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 TMEM245Q9H330 911 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 L2HGDHQ9H9P8 463 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 VPS45Q9NRW7 570 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GOLGA6AQ9NYA3 693 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SUN2Q9UH99 717 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 PCYOX1Q9UHG3 505 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 MUTYHQ9UIF7 546 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 TPX2Q9ULW0 747 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SCML1Q9UN30 329 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ERVW-1Q9UQF0 538 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 MFHAS1Q9Y4C4 1052 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SPTBN5Q9NRC6 3674 aaKnown RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 C5orf60A6NFR6 353 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SHISA7A6NL88 538 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 WASH3PC4AMC7 463 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 PRRT4C9JH25 899 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 H7C0C1 242 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 K7EQS6 105 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 AP3B1O00203 1094 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 URI1O94763 535 aaPredicted RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 TMCC1O94876 653 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 PEX11BO96011 259 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 IL2RAP01589 272 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CHRNB1P11230 501 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SRCP12931 536 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CCNB1P14635 433 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 AOC1P19801 751 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 NTSR1P30989 418 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 HOXA6P31267 233 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CXCR5P32302 372 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 FDFT1P37268 417 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 MMP13P45452 471 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 RECQLP46063 649 aaPredicted RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 ATP5OP48047 213 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SOX9P48436 509 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SUOXP51687 545 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CLCN5P51795 746 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 RHOAP61586 193 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CCDC15Q0P6D6 951 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SLC10A2Q12908 348 aaPredicted RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF234Q14588 700 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 STARD3Q14849 445 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 PON2Q15165 354 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 HNRNPA1L2Q32P51 320 aaKnown RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 TEX44Q53QW1 395 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 TMEM215Q68D42 235 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 FSTL4Q6MZW2 842 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 TXNDC11Q6PKC3 985 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SERPINA13PQ6UXR4 307 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SYT13Q7L8C5 426 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 MAATS1Q7Z4T9 603 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF354CQ86Y25 554 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 KLHDC8BQ8IXV7 354 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 APCDD1Q8J025 514 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SIX5Q8N196 739 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SPEM1Q8N4L4 309 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 NAT16Q8N8M0 369 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 PRELID2Q8N945 189 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CCDC89Q8N998 374 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 ATL2Q8NHH9 583 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 HCAR2Q8TDS4 363 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 USP33Q8TEY7 942 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 FRS2Q8WU20 508 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 RUBCNQ92622 972 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 BHMTQ93088 406 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 P2RY11Q96G91 374 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 MYO19Q96H55 970 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 CELF6Q96J87 481 aaKnown RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 MRGPRX3Q96LB0 322 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SPATA13Q96N96 652 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 NUDCD1Q96RS6 583 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SRPK1Q96SB4 655 aaKnown RBP6.82□□□□□ -1.32
UPF3B-205ENST00000636792 SPON2Q9BUD6 331 aa6.82□□□□□ -1.32
UPF3B-205ENST00000636792 OSBPL1AQ9BXW6 950 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms