RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 PABPC3Q9H361 631 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 PDFQ9HBH1 243 aa16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 CD93Q9NPY3 652 aa16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 ITM2CQ9NQX7 267 aa16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 DDX56Q9NY93 547 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 PLXNA2O75051 1894 aa16.47■□□□□ 0.23
CACNA1A-229ENST00000636670 GOLGA4Q13439 2230 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 TEX51A0A1B0GUA7 166 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 C1QTNF3-AMACRE9PGA6 284 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 K7ERQ8 282 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 MCF2LO15068 1137 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 DKK1O94907 266 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 KRT1P04264 644 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 CD48P09326 243 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 AMPD1P23109 780 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 CD6P30203 668 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 RECQLP46063 649 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 PSMD8P48556 350 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 TPMTP51580 245 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 KCNC4Q03721 635 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 ATP13A4Q4VNC1 1196 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 INO80DQ53TQ3 878 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 ZFYVE27Q5T4F4 411 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 LRRC69Q6ZNQ3 347 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 USP30Q70CQ3 517 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 PLPP6Q8IY26 295 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 KCTD6Q8NC69 237 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 OR2A12Q8NGT7 310 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 SETD7Q8WTS6 366 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 FCRL3Q96P31 734 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 FAM129BQ96TA1 746 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 SLC39A8Q9C0K1 460 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 LACRTQ9GZZ8 138 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 SP110Q9HB58 689 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 ETNK2Q9NVF9 386 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 SALL4Q9UJQ4 1053 aa16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 FCF1Q9Y324 198 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-229ENST00000636670 LRRD1A4D1F6 860 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 BUB1O43683 1085 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 MFSD11O43934 449 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 PRAMEF11O60813 436 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 TMCC1O94876 653 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 GSRP00390 522 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 C5AR1P21730 350 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 KDELR1P24390 212 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 IL4RP24394 825 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 PAPOLAP51003 745 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 KIF5AQ12840 1032 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 MMRN1Q13201 1228 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 IFI16Q16666 785 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 ANKRD20A8PQ5CZ79 823 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 FAM46CQ5VWP2 391 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 NCBP2-AS2Q69YL0 99 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 DAAM2Q86T65 1068 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 MARCH9Q86YJ5 346 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 MMAAQ8IVH4 418 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 LRRC8AQ8IWT6 810 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 ZDHHC5Q9C0B5 715 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 TOR4AQ9NXH8 423 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 WSB2Q9NYS7 404 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 UBA2Q9UBT2 640 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 SUSD2Q9UGT4 822 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 FZD4Q9ULV1 537 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 MFHAS1Q9Y4C4 1052 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 ALG6Q9Y672 507 aa16.45■□□□□ 0.22
CACNA1A-229ENST00000636670 DFFAO00273 331 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 MID1O15344 667 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 BNIP3LO60238 219 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 IL1BP01584 269 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 PRNPP04156 253 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 EIF2S3P41091 472 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 SNRPD1P62314 119 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 CCZ1BP86790 482 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 CCZ1P86791 482 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 IL10RBQ08334 325 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 PAFAH1B3Q15102 231 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 ODF2Q5BJF6 829 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 ATPAF2Q8N5M1 289 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 OR2AP1Q8NGE2 309 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 PCDH19Q8TAB3 1148 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 RAPGEF5Q92565 580 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 FAM131CQ96AQ9 280 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 TM6SF2Q9BZW4 377 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 TSGA10Q9BZW7 698 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 PCED1AQ9H1Q7 454 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 TNKS2Q9H2K2 1166 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 GOLPH3Q9H4A6 298 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 NCKAP1Q9Y2A7 1128 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 HYOU1Q9Y4L1 999 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 ACTL7AQ9Y615 435 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 ADGRG1Q9Y653 693 aa16.44■□□□□ 0.22
CACNA1A-229ENST00000636670 NDUFS2O75306 463 aa16.43■□□□□ 0.22
CACNA1A-229ENST00000636670 IGSF6O95976 241 aa16.43■□□□□ 0.22
CACNA1A-229ENST00000636670 GNSP15586 552 aa16.43■□□□□ 0.22
CACNA1A-229ENST00000636670 CHRNA3P32297 505 aa16.43■□□□□ 0.22
CACNA1A-229ENST00000636670 SLC8A1P32418 973 aa16.43■□□□□ 0.22
CACNA1A-229ENST00000636670 CCNHP51946 323 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms