RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 RABL6Q3YEC7 729 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 LEXMQ3ZCV2 418 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 CTXN3Q4LDR2 81 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 DEPDC1Q5TB30 811 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 PXDC1Q5TGL8 231 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 DGAT2L7PQ6IED9 249 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 MZT2BQ6NZ67 158 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 CLEC9AQ6UXN8 241 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 PIK3AP1Q6ZUJ8 805 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 RASGRP2Q7LDG7 609 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 TBC1D1Q86TI0 1168 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 CHSY1Q86X52 802 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 RAB11FIP4Q86YS3 637 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 FSTL5Q8N475 847 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 LRRC71Q8N4P6 559 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 PI4KAP1Q8N8J0 262 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 LINS1Q8NG48 757 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 CEP70Q8NHQ1 597 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 ATG4AQ8WYN0 398 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 RFFLQ8WZ73 363 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 OVCA2Q8WZ82 227 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 GOLGA1Q92805 767 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 HVCN1Q96D96 273 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 PBKQ96KB5 322 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 MACROD1Q9BQ69 325 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 REEP2Q9BRK0 252 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 OSBPL5Q9H0X9 879 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 TMX4Q9H1E5 349 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 DEFB129Q9H1M3 183 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 ABHD16BQ9H3Z7 469 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 PREBQ9HCU5 417 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 CD209Q9NNX6 404 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 ZCCHC17Q9NP64 241 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 SMC4Q9NTJ3 1288 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 LIN7CQ9NUP9 197 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 TMLHEQ9NVH6 421 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 TRNAU1APQ9NX07 287 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 NKX1-2Q9UD57 310 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 STEAP1Q9UHE8 339 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 KCND3Q9UK17 655 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 RIMKLBQ9ULI2 386 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 DRG1Q9Y295 367 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 FRYLO94915 3013 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 PARP14Q460N5 1801 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 C5orf42Q9H799 3197 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 AK9Q5TCS8 1911 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 MYH2Q9UKX2 1941 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A20PA6NIJ5 464 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 A8MVJ9 347 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 KIF28PB7ZC32 967 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 E5RJQ4 531 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 PPM1DO15297 605 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 CTIFO43310 598 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 SMAD6O43541 496 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 TSPAN3O60637 253 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 RNASEH2AO75792 299 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 KRT38O76015 456 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 IFIT1P09914 478 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 ATP1A3P13637 1013 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 PBX1P40424 430 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 RBM5P52756 815 aaKnown RBP eCLIP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 DGKQP52824 942 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 SP2Q02086 613 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 SF3A3Q12874 501 aaKnown RBP eCLIP2.72□□□□□ -1.975e-7■■■□□ 18.6
SMARCB1-208ENST00000634926 MTAPQ13126 283 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 VGLL4Q14135 290 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 KCNJ12Q14500 433 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 ST3GAL2Q16842 350 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 LY6KQ17RY6 165 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 GALNTL6Q49A17 601 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 FNDC1Q4ZHG4 1894 aaPredicted RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 CCDC184Q52MB2 194 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 TMEM196Q5HYL7 178 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 ZNF569Q5MCW4 686 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 BEND3Q5T5X7 828 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 UBAP2Q5T6F2 1119 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 CCDC30Q5VVM6 783 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A2PQ658T7 463 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 TTLL5Q6EMB2 1281 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 CFAP161Q6P656 301 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 C4orf50Q6ZRC1 276 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 SYT13Q7L8C5 426 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 DOCK3Q8IZD9 2030 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 METTL25Q8N6Q8 603 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 C11orf44Q8N8P7 122 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 TDRD7Q8NHU6 1098 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 HMGB4Q8WW32 186 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 SOCS4Q8WXH5 440 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 DNAAF4Q8WXU2 420 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 ZBTB10Q96DT7 871 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 RRP36Q96EU6 259 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 PRMT6Q96LA8 375 aaPredicted RBP2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 TRMOQ9BU70 441 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 ACTRT3Q9BYD9 372 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 AGXT2Q9BYV1 514 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 TPSD1Q9BZJ3 242 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 GPR63Q9BZJ6 419 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 CCDC134Q9H6E4 229 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 CHODLQ9H9P2 273 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 KCNK9Q9NPC2 374 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms