RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SLC12A2P55011 1212 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 MTTPP55157 894 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 INHBEP58166 350 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 RPL26P61254 145 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 POU4F1Q01851 419 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 MGAT3Q09327 533 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 CDC16Q13042 620 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 HNRNPDQ14103 355 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 ARL13AQ5H913 290 aaPredicted RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 GNASQ5JWF2 1037 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 CST9Q5W186 159 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 AFMIDQ63HM1 303 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 ARHGAP36Q6ZRI8 547 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 KIAA0408Q6ZU52 694 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 PIWIL4Q7Z3Z4 852 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 SNX32Q86XE0 403 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 SPATA2LQ8IUW3 424 aaPredicted RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 CENPLQ8N0S6 344 aaPredicted RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 TMEM151AQ8N4L1 468 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 RTL3Q8N8U3 475 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 KYQ8NBH2 561 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 C2CD4AQ8NCU7 369 aaPredicted RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 ACVR1CQ8NER5 493 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 RP9Q8TA86 221 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 CALML6Q8TD86 181 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 PYDC1Q8WXC3 89 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 RSPH1Q8WYR4 309 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 CCDC124Q96CT7 223 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 FCRL2Q96LA5 508 aaPredicted RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 MRPL57Q9BQC6 102 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 SHCBP1LQ9BZQ2 653 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 SLC39A8Q9C0K1 460 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 MRPL46Q9H2W6 279 aaKnown RBP8.16□□□□□ -1.1
GPC3-204ENST00000631057 SPC25Q9HBM1 224 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 MAN1C1Q9NR34 630 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 MRGBPQ9NV56 204 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 TMLHEQ9NVH6 421 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 RBM22Q9NW64 420 aaKnown RBP eCLIP8.16□□□□□ -1.14e-11■□□□□ 11.3
GPC3-204ENST00000631057 ANKRD36A6QL64 1941 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 GREB1Q4ZG55 1949 aa8.16□□□□□ -1.1
GPC3-204ENST00000631057 A0A0U1RQF3 1178 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 HEATR9A2RTY3 570 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 ANKRD33BA6NCL7 494 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 MANSC4A6NHS7 340 aaPredicted RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 WASH4PA8MWX3 477 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 E9PAM4 449 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 NEMP1O14524 444 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 TNPO2O14787 897 aaKnown RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 GRID2O43424 1007 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 DLX3O60479 287 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 PMPCBO75439 489 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 POMCP01189 267 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 HLA-DQB2P05538 268 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SBK3P0C264 359 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SLC2A3P11169 496 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 AVPR1AP37288 418 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SLC1A2P43004 574 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 BRCC3P46736 316 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 GLRBP48167 497 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 ERFP50548 548 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 NUDT2P50583 147 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 TUBP50607 506 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SLC5A3P53794 718 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 NAGLUP54802 743 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 HUNKP57058 714 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 DNAJB13P59910 316 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 MPP1Q00013 466 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SATB1Q01826 763 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 ILF2Q12905 390 aaKnown RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 CYLC2Q14093 348 aaPredicted RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 SEPT6Q14141 434 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 DSC3Q14574 896 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 LSM12Q3MHD2 195 aaKnown RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 ZNF470Q6ECI4 717 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 OR52E8Q6IFG1 317 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 ESRP1Q6NXG1 681 aaKnown RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 C17orf99Q6UX52 265 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 CXCL17Q6UXB2 119 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 CD300LGQ6UXG3 332 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 RANBP10Q6VN20 620 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 BNC2Q6ZN30 1099 aaPredicted RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 PDSS2Q86YH6 399 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 HPS6Q86YV9 775 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 DENND6AQ8IWF6 608 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 AFAP1L2Q8N4X5 818 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.15□□□□□ -1.1
GPC3-204ENST00000631057 OR10T2Q8NGX3 314 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SCAMP5Q8TAC9 235 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 AGR3Q8TD06 166 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 FATE1Q969F0 183 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 CCDC126Q96EE4 140 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 TSPAN17Q96FV3 270 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 ELMO2Q96JJ3 720 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 FAR2Q96K12 515 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SUSD3Q96L08 255 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 SERPINB11Q96P15 392 aa8.15□□□□□ -1.1
GPC3-204ENST00000631057 LENG8Q96PV6 779 aaPredicted RBP8.15□□□□□ -1.1
GPC3-204ENST00000631057 TRAPPC9Q96Q05 1148 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms