RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PEX11BO96011 259 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 FGGP02679 453 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 CCNB1P14635 433 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 HSPA9P38646 679 aaKnown RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 PSMD8P48556 350 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 CCNHP51946 323 aaPredicted RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 SLC10A7Q0GE19 358 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 XRCC4Q13426 336 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 HNRNPDQ14103 355 aaKnown RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 PRKD1Q15139 912 aaPredicted RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 SLC45A4Q5BKX6 768 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 SLC36A4Q6YBV0 504 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 DPY19L3Q6ZPD9 716 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 B4GALNT4Q76KP1 1039 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 TMPRSS6Q8IU80 811 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 MMAAQ8IVH4 418 aaKnown RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 SLC41A1Q8IVJ1 513 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 CDKL3Q8IVW4 592 aaPredicted RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 TSEN2Q8NCE0 465 aaKnown RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 OR6K2Q8NGY2 324 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 GRIN3AQ8TCU5 1115 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 MAIP1Q8WWC4 291 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 MAML1Q92585 1016 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 PRCCQ92733 491 aaPredicted RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 SIPA1Q96FS4 1042 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 PSKH2Q96QS6 385 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 OSBPL9Q96SU4 736 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 FAM118BQ9BPY3 351 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 FERMT1Q9BQL6 677 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 RSPH9Q9H1X1 276 aaPredicted RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 ZDHHC6Q9H6R6 413 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 NT5MQ9NPB1 228 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 ITM2CQ9NQX7 267 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 TMEM74BQ9NUR3 256 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 HECAQ9UBI9 543 aaPredicted RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 PILRBQ9UKJ0 227 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 CDV3Q9UKY7 258 aaKnown RBP14.92□□□□□ -0.02
PNKP-221ENST00000627317 TTLL3Q9Y4R7 772 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 ABCA7Q8IZY2 2146 aa14.92□□□□□ -0.02
PNKP-221ENST00000627317 PATE3B3GLJ2 98 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 C1QTNF3-AMACRE9PGA6 284 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 KRIT1O00522 736 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 TM4SF5O14894 197 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 MTSS1O43312 755 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 IL1BP01584 269 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 DNTTP04053 509 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 PRNPP04156 253 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 RBP3P10745 1247 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 ACADMP11310 421 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 TCP1P17987 556 aaKnown RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 SDHBP21912 280 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 CHRNA3P32297 505 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 HOXD12P35452 270 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 DHPSP49366 369 aaPredicted RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 TPMTP51580 245 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 ETF1P62495 437 aaKnown RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 IFI35P80217 286 aaPredicted RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 RPL6Q02878 288 aaKnown RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 RAD51Q06609 339 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 LONRF2Q1L5Z9 754 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 TTC31Q49AM3 519 aaPredicted RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 LYSMD4Q5XG99 296 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 SYT12Q8IV01 421 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 PLPP6Q8IY26 295 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 CHST14Q8NCH0 376 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 C16orf45Q96MC5 204 aaPredicted RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 FAM129BQ96TA1 746 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 HEPHQ9BQS7 1158 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 RTKNQ9BST9 563 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 RBM22Q9NW64 420 aaKnown RBP eCLIP14.91□□□□□ -0.024e-6■■■□□ 16.3
PNKP-221ENST00000627317 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 IL36AQ9UHA7 158 aa14.91□□□□□ -0.02
PNKP-221ENST00000627317 EVLQ9UI08 416 aaPredicted RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 R3HDM2Q9Y2K5 976 aaKnown RBP14.91□□□□□ -0.02
PNKP-221ENST00000627317 MAP3K13O43283 966 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 ZNF189O75820 626 aaPredicted RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 POP4O95707 220 aaKnown RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 ADH1BP00325 375 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 JCHAINP01591 159 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 ITPKAP23677 461 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 CASQ1P31415 396 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 RPS14P62263 151 aaKnown RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 ZBTB16Q05516 673 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 ITKQ08881 620 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 CST6Q15828 149 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 AASDHQ4L235 1098 aaPredicted RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 FAM46CQ5VWP2 391 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 DARS2Q6PI48 645 aaKnown RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 ARMCX6Q7L4S7 300 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 TEX26Q8N6G2 289 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 C12orf50Q8NA57 414 aaPredicted RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 PIP4K2CQ8TBX8 421 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 GANCQ8TET4 914 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 ATG4AQ8WYN0 398 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 ZNF419Q96HQ0 510 aaPredicted RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 NAP1L3Q99457 506 aaPredicted RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 MGME1Q9BQP7 344 aa14.9□□□□□ -0.02
PNKP-221ENST00000627317 FRMD8P1Q9BZ68 369 aaPredicted RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 POLR1EQ9GZS1 481 aaKnown RBP14.9□□□□□ -0.02
PNKP-221ENST00000627317 WSB2Q9NYS7 404 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms