RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 UBE2HP62256 183 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 PTK2BQ14289 1009 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 POLD3Q15054 466 aaPredicted RBP16.74■□□□□ 0.27
TRIM29-221ENST00000627238 ARL13BQ3SXY8 428 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 ZNF677Q86XU0 584 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 TTC9Q92623 222 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 NAT6Q93015 286 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 VCPIP1Q96JH7 1222 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 STK33Q9BYT3 514 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 TM6SF2Q9BZW4 377 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 SPASTQ9UBP0 616 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 OR12D3Q9UGF7 316 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 IPO11Q9UI26 975 aaKnown RBP16.74■□□□□ 0.27
TRIM29-221ENST00000627238 ACTL7AQ9Y615 435 aa16.74■□□□□ 0.27
TRIM29-221ENST00000627238 ZSCAN5CA6NGD5 496 aaPredicted RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 LMO7DNF2Z398 122 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 F8VZ95 297 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 POP4O95707 220 aaKnown RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 CYP1A1P04798 512 aaPredicted RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 MMP8P22894 467 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 PTPN9P43378 593 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 RPIAP49247 311 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 DNA2P51530 1060 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 SNRPD1P62314 119 aaKnown RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 VAC14Q08AM6 782 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 NR0B2Q15466 257 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 CDKN3Q16667 212 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 DEFB133Q30KQ1 61 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 C2CD6Q53TS8 623 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 C6orf132Q5T0Z8 1188 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 RBM44Q6ZP01 1051 aaKnown RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 STRADAQ7RTN6 431 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 EFL1Q7Z2Z2 1120 aaKnown RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 CLEC14AQ86T13 490 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 LMX1AQ8TE12 382 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 CASKIN2Q8WXE0 1202 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 CENPIQ92674 756 aaPredicted RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 GLMNQ92990 594 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 CCDC97Q96F63 343 aaPredicted RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 IL12RB2Q99665 862 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 CPNE5Q9HCH3 593 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 DKK3Q9UBP4 350 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 APOBEC3BQ9UH17 382 aaKnown RBP16.73■□□□□ 0.27
TRIM29-221ENST00000627238 GGT7Q9UJ14 662 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 SATB2Q9UPW6 733 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 MFHAS1Q9Y4C4 1052 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 BSNQ9UPA5 3926 aa16.73■□□□□ 0.27
TRIM29-221ENST00000627238 GOLGA8SH3BPF8 625 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 KLK10O43240 276 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 MMEP08473 750 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 ERCC5P28715 1186 aaPredicted RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 RBMS1P29558 406 aaKnown RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 IGFALSP35858 605 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 SUOXP51687 545 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 GSCP56915 257 aaPredicted RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 CAMK4Q16566 473 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 TPD52L1Q16890 204 aaPredicted RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 MYLK3Q32MK0 819 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 CCDC14Q49A88 953 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 INO80DQ53TQ3 878 aaPredicted RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 TAF3Q5VWG9 929 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 MACC1Q6ZN28 852 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 SLC35F3Q8IY50 421 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 CPA5Q8WXQ8 436 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 NTAN1Q96AB6 310 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 ATXN7L3BQ96GX2 97 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 NAF1Q96HR8 494 aaKnown RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 LRRC61Q9BV99 259 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 METTL5Q9NRN9 209 aaKnown RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 NOCTQ9UK39 431 aaKnown RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 PNMA8BQ9ULN7 279 aaPredicted RBP16.72■□□□□ 0.27
TRIM29-221ENST00000627238 HPCAL4Q9UM19 191 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 ITM2BQ9Y287 266 aa16.72■□□□□ 0.27
TRIM29-221ENST00000627238 CPED1A4D0V7 1026 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 C2CD4BA6NLJ0 364 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 FAM72CH0Y354 149 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 K7ENP7 123 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 NTN3O00634 580 aaPredicted RBP16.71■□□□□ 0.27
TRIM29-221ENST00000627238 NEMP1O14524 444 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 KDELR3O43731 214 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 RAMP2O60895 175 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 GCATO75600 419 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 LRIG2O94898 1065 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 UGT2B4P06133 528 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 GKP32189 559 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 PEX5P50542 639 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 THOP1P52888 689 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 PDX1P52945 283 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 ATP11AP98196 1134 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
TRIM29-221ENST00000627238 C3orf38Q5JPI3 329 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 PERM1Q5SV97 790 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 ARHGAP40Q5TG30 622 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 FAM72AQ5TYM5 149 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 NAA35Q5VZE5 725 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 FAM72DQ6L9T8 149 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 INO80CQ6PI98 192 aaPredicted RBP16.71■□□□□ 0.27
TRIM29-221ENST00000627238 GDPD4Q6W3E5 623 aa16.71■□□□□ 0.27
TRIM29-221ENST00000627238 FAM72BQ86X60 149 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms