RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 GLOD4Q9HC38 313 aa8.63□□□□□ -1.03
SGMS1-211ENST00000626236 RRAGDQ9NQL2 400 aaPredicted RBP8.63□□□□□ -1.03
SGMS1-211ENST00000626236 POLR3BQ9NW08 1133 aaPredicted RBP8.63□□□□□ -1.03
SGMS1-211ENST00000626236 HECAQ9UBI9 543 aaPredicted RBP8.63□□□□□ -1.03
SGMS1-211ENST00000626236 PCYOX1Q9UHG3 505 aa8.63□□□□□ -1.03
SGMS1-211ENST00000626236 FEZ2Q9UHY8 353 aaPredicted RBP8.63□□□□□ -1.03
SGMS1-211ENST00000626236 EVLQ9UI08 416 aaPredicted RBP8.63□□□□□ -1.03
SGMS1-211ENST00000626236 MMP17Q9ULZ9 603 aa8.63□□□□□ -1.03
SGMS1-211ENST00000626236 VPS9D1Q9Y2B5 631 aa8.63□□□□□ -1.03
SGMS1-211ENST00000626236 A0A1W2PQF6 199 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 CHURC1-FNTBB4DL54 471 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 TTI1O43156 1089 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 ATG13O75143 517 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 PSMB4P28070 264 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 RPL22P35268 128 aaKnown RBP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 CD86P42081 329 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 PTGIRP43119 386 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 RPS9P46781 194 aaKnown RBP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 VPS41P49754 854 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 TERF1P54274 439 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 MRPS25P82663 173 aaKnown RBP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 RAD51Q06609 339 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 NSUN2Q08J23 767 aaKnown RBP eCLIP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 NIPAL4Q0D2K0 466 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 DHX34Q14147 1143 aaKnown RBP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 GAS6Q14393 721 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 ELAVL3Q14576 367 aaKnown RBP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 MYLK3Q32MK0 819 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 FAXCQ5TGI0 409 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 ALG1LQ6GMV1 187 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 KIAA1211LQ6NV74 962 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 C8orf74Q6P047 294 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 NCEH1Q6PIU2 408 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 STK40Q8N2I9 435 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 NOA1Q8NC60 698 aaKnown RBP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 SPATA22Q8NHS9 363 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 ARRDC2Q8TBH0 407 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 GRIN3AQ8TCU5 1115 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 OR8D1Q8WZ84 308 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 SLCO2A1Q92959 643 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 CLDN23Q96B33 292 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 IMP4Q96G21 291 aaKnown RBP8.62□□□□□ -1.03
SGMS1-211ENST00000626236 FCRL5Q96RD9 977 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 RBM15Q96T37 977 aaKnown RBP eCLIP8.62□□□□□ -1.032e-6■■■□□ 14.9
SGMS1-211ENST00000626236 TRIM51Q9BSJ1 452 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 SLC25A51Q9H1U9 297 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 GBA3Q9H227 469 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 CHRDQ9H2X0 955 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 NOD2Q9HC29 1040 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 PCDH9Q9HC56 1237 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 PRSS16Q9NQE7 514 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 UBP1Q9NZI7 540 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 PAK5Q9P286 719 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 IL36AQ9UHA7 158 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 ASIC3Q9UHC3 531 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 F5P12259 2224 aa8.62□□□□□ -1.03
SGMS1-211ENST00000626236 TECTAO75443 2155 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 TCRBV21S2A2A0A5A6 115 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 TNFRSF10AO00220 468 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 ALOX15BO15296 676 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 RAD51CO43502 376 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PI15O43692 258 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 RNASEH1O60930 286 aaKnown RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 LEFTY1O75610 366 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PIGNO95427 931 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 METTL18O95568 372 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 POP4O95707 220 aaKnown RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 MT-CYBP00156 380 aaPredicted RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 IL1BP01584 269 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 UGT2B4P06133 528 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 CTSLP07711 333 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 MMP2P08253 660 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 SERPINF2P08697 491 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 AOC1P19801 751 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 CR2P20023 1033 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 CES1P23141 567 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 SERPINA4P29622 427 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 FDFT1P37268 417 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 ADCY8P40145 1251 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 MAPK8P45983 427 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PSMD8P48556 350 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 CSNK1DP48730 415 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 LMAN1P49257 510 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 AP1S1P61966 158 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 BASP1P80723 227 aaKnown RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 SKOR1P84550 965 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 BCL2L1Q07817 233 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 GPS1Q13098 491 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 CAMK2GQ13555 558 aaPredicted RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PTK6Q13882 451 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PRPSAP1Q14558 356 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 GRM3Q14832 879 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PCSK7Q16549 785 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 PARP6Q2NL67 630 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 RALGPS1Q5JS13 557 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 SYCP2LQ5T4T6 812 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 C4orf22Q6V702 233 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 SYDE1Q6ZW31 735 aaPredicted RBP8.61□□□□□ -1.03
SGMS1-211ENST00000626236 SYT13Q7L8C5 426 aa8.61□□□□□ -1.03
SGMS1-211ENST00000626236 MAATS1Q7Z4T9 603 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms