RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 OR12D1P0DN82 309 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ARP10275 920 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 IST1P53990 364 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 PDIA5Q14554 519 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 POPDC2Q9HBU9 364 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 TIMMDC1Q9NPL8 285 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ADGBQ8N7X0 1667 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CPS1P31327 1500 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CCL16O15467 120 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 KDSRQ06136 332 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ITGA7Q13683 1181 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 PITRM1Q5JRX3 1037 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 GTF2IRD2BQ6EKJ0 949 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 GTF2IRD2Q86UP8 949 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 RAB39BQ96DA2 213 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 PGLYRP2Q96PD5 576 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FTSJ1Q9UET6 329 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SNX7Q9UNH6 387 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 TTC34A8MYJ7 566 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 H3BN98 237 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 HBQ1P09105 142 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SLC1A2P43004 574 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 GJA8P48165 433 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 MBTD1Q05BQ5 628 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 BNIP1Q12981 228 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 MAD2L1BPQ15013 274 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ACAP1Q15027 740 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 LLGL1Q15334 1064 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 C12orf60Q5U649 245 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 KIAA0895LQ68EN5 471 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 DUPD1Q68J44 220 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CDC42EP5Q6NZY7 148 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 KIAA0408Q6ZU52 694 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 TRPC4APQ8TEL6 797 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CYGBQ8WWM9 190 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 PIGBOS1A0A0B4J2F0 54 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 GLTPD2A6NH11 291 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 AP5Z1O43299 807 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SUPT7LO94864 414 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 FARS2O95363 451 aaKnown RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CHMP24386 653 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 GNALP38405 381 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CRISP1P54107 249 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CNSTQ6PJW8 725 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SMPDL3BQ92485 455 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 BORCS8Q96FH0 119 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ZNF607Q96SK3 696 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CATSPERZQ9NTU4 200 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SIRPGQ9P1W8 387 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CDH5P33151 784 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 CLCN7P51798 805 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 C4orf46Q504U0 113 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 POP5Q969H6 163 aaKnown RBP6.35□□□□□ -1.39
CDKL5-205ENST00000623535 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 GAL3ST4Q96RP7 486 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 OPTCQ9UBM4 332 aa6.35□□□□□ -1.39
CDKL5-205ENST00000623535 ABHD14A-ACY1A0A1B0GW23 586 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 AMPD1P23109 780 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 FASTKD3Q14CZ7 662 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 DDR2Q16832 855 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 SLC9B1Q4ZJI4 515 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 ANKS1BQ7Z6G8 1248 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 DCP2Q8IU60 420 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 HID1Q8IV36 788 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 REPS2Q8NFH8 660 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 CELF1Q92879 486 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 UCN3Q969E3 161 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 MAP3K3Q99759 626 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 CADM1Q9BY67 442 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 EIF3KQ9UBQ5 218 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 GMPPBQ9Y5P6 360 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 E2F3O00716 465 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 TP53I11O14683 189 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 LARGE1O95461 756 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 APOC1P02654 83 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 CRYBA1P05813 215 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 EIF4EP06730 217 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 OMPP47874 163 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 FXR1P51114 621 aaKnown RBP eCLIP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 ARF5P84085 180 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 SF3A3Q12874 501 aaKnown RBP eCLIP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 MROH9Q5TGP6 573 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 DCLRE1AQ6PJP8 1040 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 MON1BQ7L1V2 547 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 ARL14Q8N4G2 192 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 SNIP1Q8TAD8 396 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 PNPLA8Q9NP80 782 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 GDF3Q9NR23 364 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 DDX20Q9UHI6 824 aaKnown RBP6.34□□□□□ -1.39
CDKL5-205ENST00000623535 ANGPT4Q9Y264 503 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 DPPA5A6NC42 116 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 DNAJA2O60884 412 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 SASH3O75995 380 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 PDGFRLQ15198 375 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 NR6A1Q15406 480 aa6.34□□□□□ -1.39
CDKL5-205ENST00000623535 AMHR2Q16671 573 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms