RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PLOD2O00469 737 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 DDI2Q5TDH0 399 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 ATCAYQ86WG3 371 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 RASAL3Q86YV0 1011 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 MKL1Q969V6 931 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 FUBP3Q96I24 572 aaKnown RBP eCLIP7.24□□□□□ -1.25
COLCA1-205ENST00000620864 FAM84BQ96KN1 310 aaPredicted RBP7.24□□□□□ -1.25
COLCA1-205ENST00000620864 CRISPLD1Q9H336 500 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 PRMT7Q9NVM4 692 aaPredicted RBP7.24□□□□□ -1.25
COLCA1-205ENST00000620864 TAS2R13Q9NYV9 303 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 TAS2R7Q9NYW3 318 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 SLC9A8Q9Y2E8 581 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 DAGLAQ9Y4D2 1042 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 PCDHB12Q9Y5F1 795 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 UMODL1Q5DID0 1318 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 PLA2R1Q13018 1463 aa7.24□□□□□ -1.25
COLCA1-205ENST00000620864 MLYCDO95822 493 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 SNRPB2P08579 225 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 DGCR6Q14129 220 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 PTPAQ15257 358 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 INTS5Q6P9B9 1019 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CD99L2Q8TCZ2 262 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 HDAC2Q92769 488 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CLEC4AQ9UMR7 237 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ENTPD4Q9Y227 616 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 C17orf102A2RUQ5 167 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 H7C2Y5 167 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 LARGE1O95461 756 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ITGA4P13612 1032 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CXCR2P25025 360 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 DCKP27707 260 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 INHBEP58166 350 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 NACC2Q96BF6 587 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 DEFB118Q96PH6 123 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 SCGB3A2Q96PL1 93 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 SHCBP1LQ9BZQ2 653 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CD163L1Q9NR16 1453 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 MST1RQ04912 1400 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 NCOA3Q9Y6Q9 1424 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF432O94892 652 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 RLN2P04090 185 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 NTSP30990 170 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 FXR2P51116 673 aaKnown RBP eCLIP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 FOLH1Q04609 750 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 LACTB2Q53H82 288 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 MFSD7Q6UXD7 560 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 TMC7Q7Z402 723 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ARMC8Q8IUR7 673 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 TEX47Q8TBZ9 253 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 AENQ8WTP8 325 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 HOPXQ9BPY8 73 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CHST12Q9NRB3 414 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 TRIM64CA6NLI5 447 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 SUPT20HL2P0C7V6 817 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CSH1P0DML2 217 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CSH2P0DML3 217 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 UMPSP11172 480 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 DBTP11182 482 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 KLRC1P26715 233 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 NMT1P30419 496 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ELP6Q0PNE2 266 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 RFTN2Q52LD8 501 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 N4BP2L1Q5TBK1 243 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 AGMOQ6ZNB7 445 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 QSOX2Q6ZRP7 698 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CBWD2Q8IUF1 395 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 MREGQ8N565 214 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 BPIFB6Q8NFQ5 453 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 PIWIL2Q8TC59 973 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 MARCH7Q9H992 704 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ANKEF1Q9NU02 776 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 AGPAT5Q9NUQ2 364 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 DPP7Q9UHL4 492 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 POLRMTO00411 1230 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 TGDSO95455 350 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 FESP07332 822 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 YES1P07947 543 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 BMP7P18075 431 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 STARD3Q14849 445 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 R3HCC1LQ7Z5L2 792 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 SLC25A41Q8N5S1 370 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 LZTR1Q8N653 840 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 PHF10Q8WUB8 498 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 RAB2BQ8WUD1 216 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ATL1Q8WXF7 558 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 SLC35C2Q9NQQ7 365 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ARF3P61204 181 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ARF1P84077 181 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 RBBP4Q09028 425 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF177Q13360 481 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 BAATQ14032 418 aaPredicted RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 EGFLAMQ63HQ2 1017 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 GPAT2Q6NUI2 795 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 TNFAIP8L1Q8WVP5 186 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 TATDN2Q93075 761 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 PPP3R2Q96LZ3 170 aa7.23□□□□□ -1.25
COLCA1-205ENST00000620864 RBM4BQ9BQ04 359 aaKnown RBP7.23□□□□□ -1.25
COLCA1-205ENST00000620864 CCDC3Q9BQI4 270 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms