RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 INO80DQ53TQ3 878 aaPredicted RBP17.41■□□□□ 0.38
HMGN3-203ENST00000620514 ERMARDQ5T6L9 678 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 GDPD4Q6W3E5 623 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 KDM7AQ6ZMT4 941 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 ABI3BPQ7Z7G0 1075 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 SLC22A18ASQ8N1D0 253 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 EXOC2Q96KP1 924 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 GDAP1L1Q96MZ0 367 aa17.41■□□□□ 0.38
HMGN3-203ENST00000620514 FAM149AA5PLN7 773 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 POM121BA6NF01 834 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 J3KR12 359 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 NEMP1O14524 444 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 RNF8O76064 485 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 IGSF6O95976 241 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 CAPNS1P04632 268 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 ITIH2P19823 946 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 HTR7P34969 479 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 CLDN6P56747 220 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 UBASH3AP57075 661 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 TPM4P67936 248 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 TDRD12Q587J7 1177 aaKnown RBP17.4■□□□□ 0.38
HMGN3-203ENST00000620514 Q6ZSR6 202 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 SLC25A45Q8N413 288 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 FNIP1Q8TF40 1166 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 CPLX3Q8WVH0 158 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 CASKIN2Q8WXE0 1202 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 RAB7BQ96AH8 199 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 C1QTNF2Q9BXJ5 285 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 OSBPL1AQ9BXW6 950 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 SLC39A8Q9C0K1 460 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 ISCUQ9H1K1 167 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 PDFQ9HBH1 243 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 KLHL11Q9NVR0 708 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 UCKL1Q9NWZ5 548 aa17.4■□□□□ 0.38
HMGN3-203ENST00000620514 UBA2Q9UBT2 640 aaPredicted RBP17.4■□□□□ 0.38
HMGN3-203ENST00000620514 A0A1W2PQJ5 194 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 SRRM3A6NNA2 597 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 A6NNZ2 444 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 TAF4O00268 1085 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 TSPAN6O43657 245 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 PRPSAP2O60256 369 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 LRCH4O75427 683 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 ERCC2P18074 760 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 PAPOLAP51003 745 aaKnown RBP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 NDST2P52849 883 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 RAD51Q06609 339 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 SMAD1Q15797 465 aaKnown RBP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 ZNF542PQ5EBM4 170 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 PPP6R3Q5H9R7 873 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 RFX8Q6ZV50 586 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 PTAR1Q7Z6K3 402 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 TRIM11Q96F44 468 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 KLF6Q99612 283 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 MFHAS1Q9Y4C4 1052 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 HS3ST3A1Q9Y663 406 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 SCINQ9Y6U3 715 aa17.39■□□□□ 0.37
HMGN3-203ENST00000620514 ARID1BQ8NFD5 2236 aaPredicted RBP17.39■□□□□ 0.37
HMGN3-203ENST00000620514 TRIM38O00635 465 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 AREL1O15033 823 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 DAPK3O43293 454 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 PRAMEF11O60813 436 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 PIGNO95427 931 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 MYBL1P10243 752 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 TCF4P15884 667 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 TIMP2P16035 220 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 DGKAP23743 735 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 IL1R2P27930 398 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 ACADVLP49748 655 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 SGCGQ13326 291 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 TPRG1LQ5T0D9 272 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 KYAT3Q6YP21 454 aaKnown RBP17.38■□□□□ 0.37
HMGN3-203ENST00000620514 ARHGAP36Q6ZRI8 547 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 TTC7BQ86TV6 843 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 ARHGAP12Q8IWW6 846 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 GALNT15Q8N3T1 639 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 NPWQ8N729 165 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 TSC1Q92574 1164 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 GPR27Q9NS67 375 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 PCDHGA1Q9Y5H4 931 aa17.38■□□□□ 0.37
HMGN3-203ENST00000620514 ARHGAP42A6NI28 874 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 EIF3CLB5ME19 914 aaKnown RBP17.37■□□□□ 0.37
HMGN3-203ENST00000620514 GOLGA6L19H0YKK7 550 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 SIGLEC6O43699 453 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 MMP20O60882 483 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 RFPL3O75679 317 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 PIAS2O75928 621 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 RGRP47804 291 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 FZD2Q14332 565 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 PROX2Q3B8N5 592 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 ZSCAN23Q3MJ62 389 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 AFMIDQ63HM1 303 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 TP53INP2Q8IXH6 220 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 MDM1Q8TC05 714 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 SYN2Q92777 582 aaPredicted RBP17.37■□□□□ 0.37
HMGN3-203ENST00000620514 LENG8Q96PV6 779 aaPredicted RBP17.37■□□□□ 0.37
HMGN3-203ENST00000620514 EIF3CQ99613 913 aaKnown RBP17.37■□□□□ 0.37
HMGN3-203ENST00000620514 THAP2Q9H0W7 228 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 MRPL47Q9HD33 250 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms