RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 EDDM13A0A1B0GTR0 161 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 CES2O00748 559 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 CDX4O14627 284 aaPredicted RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 MCF2LO15068 1137 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 INSIG1O15503 277 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 FGGP02679 453 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 CTSLP07711 333 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 IGF2RP11717 2491 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 GABRG2P18507 467 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 MSNP26038 577 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 NNMTP40261 264 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 P2RY2P41231 377 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 NOVA1P51513 510 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 GEMIN4P57678 1058 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 HNRNPDQ14103 355 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 RFTN1Q14699 578 aaPredicted RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 LBRQ14739 615 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 ACCSLQ4AC99 568 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 CARD16Q5EG05 197 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 SDE2Q6IQ49 451 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 SYT10Q6XYQ8 523 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 BZW1Q7L1Q6 419 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 ARMCX6Q7L4S7 300 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 ZC3H18Q86VM9 953 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 STK40Q8N2I9 435 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 PCDH20Q8N6Y1 951 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 TSEN2Q8NCE0 465 aaKnown RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 CHST14Q8NCH0 376 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 HMGB4Q8WW32 186 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 PSKH2Q96QS6 385 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 NAPGQ99747 312 aaPredicted RBP13.6□□□□□ -0.23
PDCD6-213ENST00000618970 SLC6A17Q9H1V8 727 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 TNKS2Q9H2K2 1166 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 USP29Q9HBJ7 922 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 SMARCAL1Q9NZC9 954 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 SARDHQ9UL12 918 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 WASF2Q9Y6W5 498 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 GON4LQ3T8J9 2241 aa13.6□□□□□ -0.23
PDCD6-213ENST00000618970 ASCC3Q8N3C0 2202 aaKnown RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 TCRBV21S2A2A0A5A6 115 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 TTC24A2A3L6 582 aaPredicted RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 KHNYNO15037 678 aaKnown RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 GJB3O75712 270 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 ALDH1A2O94788 518 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 GSRP00390 522 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 RBL1P28749 1068 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 PI4KAP42356 2102 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 PTGER3P43115 390 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 IRX4P78413 519 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 IFI35P80217 286 aaPredicted RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 NSUN2Q08J23 767 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 AP1B1Q10567 949 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 WASHC5Q12768 1159 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 ZBTB17Q13105 803 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 OASLQ15646 514 aaKnown RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 MAP7D1Q3KQU3 841 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 ATXN7L2Q5T6C5 722 aaPredicted RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 TMCO4Q5TGY1 634 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 TIGD7Q6NT04 549 aaPredicted RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 DPY19L3Q6ZPD9 716 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 ADAT2Q7Z6V5 191 aaKnown RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 CREG2Q8IUH2 290 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 TMEFF1Q8IYR6 380 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 CCNYQ8ND76 341 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 OR2T3Q8NH03 318 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 ACTRT1Q8TDG2 376 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 PIGKQ92643 395 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 QKIQ96PU8 341 aaKnown RBP eCLIP13.59□□□□□ -0.232e-16■■■■■ 59
PDCD6-213ENST00000618970 BRD8Q9H0E9 1235 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 RSPH9Q9H1X1 276 aaPredicted RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 TMEM9BQ9NQ34 198 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 BCCIPQ9P287 314 aaKnown RBP eCLIP13.59□□□□□ -0.237e-7■■■■□ 23
PDCD6-213ENST00000618970 DNPEPQ9ULA0 475 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 PPM1HQ9ULR3 514 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 ATP8A1Q9Y2Q0 1164 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 LRRK1Q38SD2 2015 aa13.59□□□□□ -0.23
PDCD6-213ENST00000618970 ATXN2Q99700 1313 aaKnown RBP13.59□□□□□ -0.23
PDCD6-213ENST00000618970 CTAGE9A4FU28 777 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 HACD1B0YJ81 288 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 KCNK1O00180 336 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 PPP1R12AO14974 1030 aaPredicted RBP13.58□□□□□ -0.24
PDCD6-213ENST00000618970 JCHAINP01591 159 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 HLA-DQB2P05538 268 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 RBP3P10745 1247 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 CCNB1P14635 433 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 TCP1P17987 556 aaKnown RBP13.58□□□□□ -0.24
PDCD6-213ENST00000618970 NDUFV2P19404 249 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 GKP32189 559 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 CSNK1DP48730 415 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 METAP1P53582 386 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
PDCD6-213ENST00000618970 RPS14P62263 151 aaKnown RBP13.58□□□□□ -0.24
PDCD6-213ENST00000618970 MYLK3Q32MK0 819 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 SLC45A4Q5BKX6 768 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 MARC1Q5VT66 337 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 ALG1LQ6GMV1 187 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 LPCAT2Q7L5N7 544 aa13.58□□□□□ -0.24
PDCD6-213ENST00000618970 METTL3Q86U44 580 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms