RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 GBP7Q8N8V2 638 aaPredicted RBP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 GPR22Q99680 433 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 MYLK2Q9H1R3 596 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 IL23AQ9NPF7 189 aa17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCDHGC3-205ENST00000617641 A0A0G2JND7 137 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 A0A1B0GVM2 712 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 TCAF2A6NFQ2 919 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 H0YHG0 523 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 IL1BP01584 269 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 SAT1P21673 171 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 KCNA4P22459 653 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 SLC1A2P43004 574 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 OXCT1P55809 520 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 THOC5Q13769 683 aaKnown RBP17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 TSTD2Q5T7W7 516 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 CHST9Q7L1S5 443 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 NLRP9Q7RTR0 991 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 RETREG1Q9H6L5 497 aa17.52■□□□□ 0.4
PCDHGC3-205ENST00000617641 LOC285095A0A1B0GVY8 99 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 CARNS1A5YM72 827 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 TGM5O43548 720 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 KDELR3O43731 214 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 MPOP05164 745 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 C2P06681 752 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 LINC00271P0C7V0 271 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZXDBP98169 803 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 BNIP1Q12981 228 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 PCLAFQ15004 111 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZNF470Q6ECI4 717 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 TTC16Q8NEE8 873 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 ERP27Q96DN0 273 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 RANBP9Q96S59 729 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 C20orf27Q9GZN8 174 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 RASSF4Q9H2L5 321 aa17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 UBA2Q9UBT2 640 aaPredicted RBP17.52■□□□□ 0.39
PCDHGC3-205ENST00000617641 OBSL1O75147 1896 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 ILVBLA1L0T0 632 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 CSPG5O95196 566 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 TGDSO95455 350 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 CTSAP10619 480 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 OCRLQ01968 901 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 CCDC15Q0P6D6 951 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 SETDB1Q15047 1291 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 MBLAC2Q68D91 279 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 ITIH5Q86UX2 942 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 FIBCD1Q8N539 461 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 RAB3IL1Q8TBN0 382 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZNF398Q8TD17 642 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 ADAMTS19Q8TE59 1207 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 IFT43Q96FT9 208 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 LRRC37BQ96QE4 947 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 ECT2Q9H8V3 914 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 KCNK13Q9HB14 408 aa17.51■□□□□ 0.39
PCDHGC3-205ENST00000617641 SIN3BO75182 1162 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 DCTN3O75935 186 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 FGF3P11487 239 aaPredicted RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 RGRP47804 291 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CYP4F8P98187 520 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CDK18Q07002 472 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 STX3Q13277 289 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 GALNT3Q14435 633 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 USP10Q14694 798 aaKnown RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 RNF219Q5W0B1 726 aaPredicted RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CXorf57Q6NSI4 855 aaKnown RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 NEPROQ6NW34 567 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CLEC14AQ86T13 490 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 SLC41A1Q8IVJ1 513 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 HERC6Q8IVU3 1022 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 C10orf107Q8IVU9 208 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 MFSD6LQ8IWD5 586 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 KLHL23Q8NBE8 558 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 OR13J1Q8NGT2 312 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 PPP1R14CQ8TAE6 165 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 EXOC2Q96KP1 924 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 C7orf26Q96N11 449 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 MGME1Q9BQP7 344 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CINPQ9BW66 212 aaPredicted RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 SEPT3Q9UH03 358 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 TBC1D30Q9Y2I9 924 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 C2orf71A6NGG8 1288 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CBX4O00257 560 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 CCL22O00626 93 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 PHGDHO43175 533 aaKnown RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 SNNO75324 88 aaPredicted RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 DNAJC8O75937 253 aaPredicted RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 DLDP09622 509 aaKnown RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 GABRR2P28476 465 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 AVPR1AP37288 418 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 NCALDP61601 193 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 UGP2Q16851 508 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 ALG1LQ6GMV1 187 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 RAPH1Q70E73 1250 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 SETD3Q86TU7 594 aaPredicted RBP17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 RNF135Q8IUD6 432 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 HS6ST3Q8IZP7 471 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 TNS4Q8IZW8 715 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 BBS5Q8N3I7 341 aa17.5■□□□□ 0.39
PCDHGC3-205ENST00000617641 C2CD4AQ8NCU7 369 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms