RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 POLNQ7Z5Q5 900 aa6.06□□□□□ -1.44
RFX3-212ENST00000617270 MCEMP1Q8IX19 187 aa6.06□□□□□ -1.44
RFX3-212ENST00000617270 SFRP1Q8N474 314 aa6.06□□□□□ -1.44
RFX3-212ENST00000617270 PTGR2Q8N8N7 351 aaPredicted RBP6.06□□□□□ -1.44
RFX3-212ENST00000617270 MAGEC3Q8TD91 643 aa6.06□□□□□ -1.44
RFX3-212ENST00000617270 CXorf40AQ8TE69 158 aa6.06□□□□□ -1.44
RFX3-212ENST00000617270 UBE2E3Q969T4 207 aa6.06□□□□□ -1.44
RFX3-212ENST00000617270 CORO2BQ9UQ03 480 aa6.06□□□□□ -1.44
RFX3-212ENST00000617270 R3HDM2Q9Y2K5 976 aaKnown RBP6.06□□□□□ -1.44
RFX3-212ENST00000617270 SGTAO43765 313 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PQBP1O60828 265 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 CATP04040 527 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 KCNA5P22460 613 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 AZGP1P25311 298 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 SERPINA4P29622 427 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 RPA3P35244 121 aaPredicted RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 GALK1P51570 392 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SREBF2Q12772 1141 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 XKR6Q5GH73 641 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 FAM171A1Q5VUB5 890 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 BICRALQ6AI39 1079 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 THOC7Q6I9Y2 204 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 CNSTQ6PJW8 725 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PTCHD4Q6ZW05 846 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 RASAL3Q86YV0 1011 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SPERTQ8NA61 448 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 CHST4Q8NCG5 386 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 TBC1D16Q8TBP0 767 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 MCMBPQ9BTE3 642 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 MROH8Q9H579 483 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PLEKHA1Q9HB21 404 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 NECTIN3Q9NQS3 549 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SPEF1Q9Y4P9 236 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PCDHB5Q9Y5E4 795 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 TIMM8BQ9Y5J9 83 aaPredicted RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 TNPO3Q9Y5L0 923 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 ZSCAN5CA6NGD5 496 aaPredicted RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 TEX46H3BTG2 121 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ZNF208O43345 1280 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 GRK5P34947 590 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 TBX2Q13207 712 aaPredicted RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 ZFP69Q49AA0 526 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ZZZ3Q8IYH5 903 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PTCD2Q8WV60 388 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 SUSD6Q92537 303 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SLC47A1Q96FL8 570 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SERPINB11Q96P15 392 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 GFM1Q96RP9 751 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 MLXQ9UH92 298 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ZNF221Q9UK13 617 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ADGRL2O95490 1459 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 OR14I1A6ND48 311 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ULK1O75385 1050 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ITPKBP27987 946 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SEPHS1P49903 392 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 NFE2Q16621 373 aaPredicted RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 SNAP47Q5SQN1 464 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 DHDDSQ86SQ9 333 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SCUBE3Q8IX30 993 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SLC4A11Q8NBS3 891 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 OR4A15Q8NGL6 344 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 TP53INP1Q96A56 240 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 LENG1Q96BZ8 264 aaPredicted RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 SMARCD1Q96GM5 515 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SLC6A15Q9H2J7 730 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 BPIFA1Q9NP55 256 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SPAG4Q9NPE6 437 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 UGT2B17O75795 530 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 DNASE1L1P49184 302 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 MAN2A2P49641 1150 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 FXR2P51116 673 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFX3-212ENST00000617270 TNK2Q07912 1038 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SQLEQ14534 574 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 GFOD2Q3B7J2 385 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SCIMPQ6UWF3 145 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 KIAA1324Q6UXG2 1013 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 WDR49Q8IV35 697 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 CEP295NLQ96MC4 621 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 DGKBQ9Y6T7 804 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ABCA5Q8WWZ7 1642 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 AVILO75366 819 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 THRBP10828 461 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 GHRP10912 638 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ALADP13716 330 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 TCEA1P23193 301 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 S100A2P29034 98 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PSME3P61289 254 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 MBTD1Q05BQ5 628 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 UBAP2LQ14157 1087 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 ZNF484Q5JVG2 852 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PAGE2Q7Z2X7 111 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 SNX20Q7Z614 316 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ATP6V1C2Q8NEY4 427 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ATXN2LQ8WWM7 1075 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 MED28Q9H204 178 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 EQTNQ9NQ60 294 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 PCDHA3Q9Y5H8 950 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 NUP153P49790 1475 aaKnown RBP6.05□□□□□ -1.44
RFX3-212ENST00000617270 FAM237BA0A1B0GVD1 139 aa6.05□□□□□ -1.44
RFX3-212ENST00000617270 ARL5CA6NH57 179 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms