RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 BRSK1Q8TDC3 778 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NUS1Q96E22 293 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SIRPGQ9P1W8 387 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 FFAR2O15552 330 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PNMA6AP0CW24 399 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 MTHFD2P13995 350 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 GFAPP14136 432 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 INSRRP14616 1297 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 UBE2HP62256 183 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ZNF200P98182 395 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 SHROOM1Q2M3G4 852 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 METTL21CQ5VZV1 264 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 FBXO38Q6PIJ6 1188 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 RASSF3Q86WH2 238 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 FAM84BQ96KN1 310 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 INTS13Q9NVM9 706 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SLC6A14Q9UN76 642 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TRIM35Q9UPQ4 493 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ZBTB7BO15156 539 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 GJA1P17302 382 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PRCPP42785 496 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MRPS21P82921 87 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 SARM1Q6SZW1 724 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 KLHL17Q6TDP4 642 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PARP9Q8IXQ6 854 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ANKRD7Q92527 254 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CCT7Q99832 543 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 FAM107BQ9H098 131 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NDE1Q9NXR1 346 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SCN8AQ9UQD0 1980 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CDH16O75309 829 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CDH2P19022 906 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 ARSFP54793 590 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 HSDL1Q3SXM5 330 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 C15orf39Q6ZRI6 1047 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ERMP1Q7Z2K6 904 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ESX1Q8N693 406 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CPB2Q96IY4 423 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NIF3L1Q9GZT8 377 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 RNF32Q9H0A6 362 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TMX1Q9H3N1 280 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 RNF14Q9UBS8 474 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PCDHB10Q9UN67 800 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SRPK3Q9UPE1 567 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 DDCP20711 480 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CCND1P24385 295 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SEMG2Q02383 582 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 DHX9Q08211 1270 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 LAPTM5Q13571 262 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ACAP1Q15027 740 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 EIF4HQ15056 248 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 VARS2Q5ST30 1063 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 PLPPR4Q7Z2D5 763 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PACS2Q86VP3 889 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ZC3HC1Q86WB0 502 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 INPP5DQ92835 1189 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ZFYVE19Q96K21 471 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PDCD2LQ9BRP1 358 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ZYG11BQ9C0D3 744 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PIK3R2O00459 728 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CHRNA3P32297 505 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NAA20P61599 178 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MAN2A1Q16706 1144 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 C3orf38Q5JPI3 329 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SLC2A11Q9BYW1 496 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CPEB1Q9BZB8 566 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 PCDHGA2Q9Y5H1 932 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MGAT4DA6NG13 374 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 EVPLLA8MZ36 301 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MSH4O15457 936 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NDST3O95803 873 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MRE11P49959 708 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 VPS26BQ4G0F5 336 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ALLCQ8N6M5 410 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TRPV3Q8NET8 790 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 FBXW5Q969U6 566 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TMCO6Q96DC7 493 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 DPY30Q9C005 99 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 DPH5Q9H2P9 285 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ST3GAL5Q9UNP4 418 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TGM5O43548 720 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 AHSGP02765 367 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CDK18Q07002 472 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TRIM59Q8IWR1 403 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NDRG1Q92597 394 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 CBWD1Q9BRT8 395 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PELOQ9BRX2 385 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 LMAN1LQ9HAT1 526 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 UBP1Q9NZI7 540 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TRPC4Q9UBN4 977 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 XPO1O14980 1071 aaKnown RBP3.38□□□□□ -1.87
LPP-220ENST00000617246 HRGP04196 525 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ALAS2P22557 587 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 RASSF2P50749 326 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ZNF543Q08ER8 600 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ANGPT1Q15389 498 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 GLT6D1Q7Z4J2 308 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 UBXN10Q96LJ8 280 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 SMURF1Q9HCE7 757 aa3.38□□□□□ -1.87
LPP-220ENST00000617246 ZNF451Q9Y4E5 1061 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms