RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 COG1Q8WTW3 980 aa16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 LRIG1Q96JA1 1093 aa16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 MS4A14Q96JA4 679 aa16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 QKIQ96PU8 341 aaKnown RBP eCLIP16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 ZDHHC6Q9H6R6 413 aa16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 EVLQ9UI08 416 aaPredicted RBP16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 PPM1HQ9ULR3 514 aa16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 SCML1Q9UN30 329 aa16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 R3HDM2Q9Y2K5 976 aaKnown RBP16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 SAR1BQ9Y6B6 198 aa16.61■□□□□ 0.25
SPTSSB-204ENST00000617024 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 KIF2AO00139 706 aaPredicted RBP16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 LEFTY1O75610 366 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 ADH1BP00325 375 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 TUBB4AP04350 444 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 C7P10643 843 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 C5AR1P21730 350 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 TGM1P22735 817 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 RBL1P28749 1068 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 PSMD8P48556 350 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 FNTBP49356 437 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 GRM3Q14832 879 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 CST6Q15828 149 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 USP39Q53GS9 565 aaKnown RBP16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 TEX44Q53QW1 395 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 NYAP1Q6ZVC0 841 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 WDR5BQ86VZ2 330 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 LONP2Q86WA8 852 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 PGBD5Q8N414 524 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 OR6K2Q8NGY2 324 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 PIP4K2CQ8TBX8 421 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 ACTRT1Q8TDG2 376 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 HTR3CQ8WXA8 447 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 EXOC2Q96KP1 924 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 MGME1Q9BQP7 344 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 CPEB1Q9BZB8 566 aaKnown RBP16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 TPSD1Q9BZJ3 242 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 C10orf88Q9H8K7 445 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 SCUBE2Q9NQ36 999 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 ITM2CQ9NQX7 267 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 HOMER3Q9NSC5 361 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 NCKAP1Q9Y2A7 1128 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 ATP8A1Q9Y2Q0 1164 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 WASF2Q9Y6W5 498 aa16.6■□□□□ 0.25
SPTSSB-204ENST00000617024 MUSKO15146 869 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 ZNF185O15231 689 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 INSIG1O15503 277 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 ZNF217O75362 1048 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 CTSLP07711 333 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 MAPK8P45983 427 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 RGRP47804 291 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 MAXP61244 160 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 DMWDQ09019 674 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 ZBTB17Q13105 803 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 SIX1Q15475 284 aaPredicted RBP16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 CCNG2Q16589 344 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 RALGPS1Q5JS13 557 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 SLC35B2Q8TB61 432 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 GANCQ8TET4 914 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 C16orf45Q96MC5 204 aaPredicted RBP16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 AGAP3Q96P47 875 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 NUDCD1Q96RS6 583 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 VAT1Q99536 393 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 OMDQ99983 421 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 OSBPL1AQ9BXW6 950 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 POLR1EQ9GZS1 481 aaKnown RBP16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 DYRK4Q9NR20 520 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 ZSCAN32Q9NX65 697 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 NCDNQ9UBB6 729 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 SARDHQ9UL12 918 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 DNPEPQ9ULA0 475 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 TTLL3Q9Y4R7 772 aa16.59■□□□□ 0.25
SPTSSB-204ENST00000617024 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 PGRMC1O00264 195 aaKnown RBP16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 KPNA3O00505 521 aaPredicted RBP16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 MID1O15344 667 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 KCNN4O15554 427 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 LIASO43766 372 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 STK10O94804 968 aaKnown RBP16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 HLA-DQB2P05538 268 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 CR2P20023 1033 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 PTPN3P26045 913 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 GKP32189 559 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 TERF1P54274 439 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 AP1S1P61966 158 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 CCDC15Q0P6D6 951 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 WASHC5Q12768 1159 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 SNX1Q13596 522 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 TTC31Q49AM3 519 aaPredicted RBP16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 NCEH1Q6PIU2 408 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 GDPD4Q6W3E5 623 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 PID1Q7Z2X4 250 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 CACUL1Q86Y37 369 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 CNTD1Q8N815 330 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 ZBTB44Q8NCP5 570 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 GRIN3AQ8TCU5 1115 aa16.58■□□□□ 0.24
SPTSSB-204ENST00000617024 ATG4AQ8WYN0 398 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms