RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 FRA10AC1Q70Z53 315 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ANKRD23Q86SG2 305 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM72BQ86X60 149 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FBXO39Q8N4B4 442 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 METTL6Q8TCB7 284 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SH3TC2Q8TF17 1288 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 COPS7BQ9H9Q2 264 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 APPL1Q9UKG1 709 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PSMD13Q9UNM6 376 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 MFHAS1Q9Y4C4 1052 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 LRRC42Q9Y546 428 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CACNA1AO00555 2505 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF487B1APH4 448 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 BEST1O76090 585 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ASGR1P07306 291 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ALDH7A1P49419 539 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLCN5P51795 746 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC5A3P53794 718 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FASTKQ14296 549 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCL14Q16627 93 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZRANB3Q5FWF4 1079 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 NET1Q7Z628 596 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 LDB1Q86U70 411 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR6Y1Q8NGX8 325 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR52B2Q96RD2 323 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TSPAN18Q96SJ8 248 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 KLHL4Q9C0H6 718 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 MID1IP1Q9NPA3 183 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 RIC8BQ9NVN3 520 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PPP1R14DQ9NXH3 145 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM8A1Q9UBU6 413 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 RAD54BQ9Y620 910 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 A0A0U1RQF3 1178 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 MBLAC1A4D2B0 266 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 LYNP07948 512 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM163BP0C2L3 166 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 HMOX2P30519 316 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC7A2P52569 658 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 MPP1Q00013 466 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 INPP5AQ14642 412 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 KIAA0930Q6ICG6 404 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZC3HC1Q86WB0 502 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZSCAN18Q8TBC5 510 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF333Q96JL9 665 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TBL1YQ9BQ87 522 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZCWPW1Q9H0M4 648 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC25A51Q9H1U9 297 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 GID8Q9NWU2 228 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLIC5Q9NZA1 410 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CNTN3Q9P232 1028 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 KANSL3Q9P2N6 904 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRMT6Q9UJA5 497 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SEC24DO94855 1032 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 OAS1P00973 400 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 AHSGP02765 367 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 NMBRP28336 390 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 HCAR3P49019 387 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 KCNK10P57789 538 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZFP1Q6P2D0 407 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 EFL1Q7Z2Z2 1120 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FBXW8Q8N3Y1 598 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 STAG3L4Q8TBR4 150 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 KCTD13Q8WZ19 329 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FCRL5Q96RD9 977 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCT7Q99832 543 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRIM54Q9BYV2 358 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZYG11BQ9C0D3 744 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ANLNQ9NQW6 1124 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 STARD7Q9NQZ5 370 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 VPS28Q9UK41 221 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 V9GYQ6 96 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SUPT3HB4E1H0 165 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PFDN1O60925 122 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SUPT3HO75486 399 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CRTAMO95727 393 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 AMHP03971 560 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PRKAR2AP13861 404 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 WARSP23381 471 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCNCP24863 283 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 HOXD10P28358 340 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ADSLP30566 484 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 AKT1P31749 480 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 MAGEA6P43360 314 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 GLUD2P49448 558 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FCGRTP55899 365 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 GRIK3Q13003 919 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PEX6Q13608 980 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 GSTA3Q16772 222 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 LSM12Q3MHD2 195 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 MAMDC4Q6UXC1 1216 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC22A9Q8IVM8 553 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLYBLQ8N0X4 340 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SPPL2BQ8TCT7 592 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 GIPC2Q8TF65 315 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 NCLNQ969V3 563 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 LNPEPQ9UIQ6 1025 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRAF6Q9Y4K3 522 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 NCF1BA6NI72 391 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 NCF1CA8MVU1 366 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 DLX3O60479 287 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms