RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 C12orf71A8MTZ7 269 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NTSR2O95665 410 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 PRKAA2P54646 552 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 RFX4Q33E94 735 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 TTC7BQ86TV6 843 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 MIER2Q8N344 545 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 TMEM132CQ8N3T6 1108 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 OR7G2Q8NG99 324 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ACTRT2Q8TDY3 377 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 IL25Q9H293 177 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 MOB1AQ9H8S9 216 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 TMEM45AQ9NWC5 275 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 WHRNQ9P202 907 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 PCDHA10Q9Y5I2 948 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 IGSF9BQ9UPX0 1349 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ASB14A6NK59 587 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NUAK1O60285 661 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 RLN2P04090 185 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SERPIND1P05546 499 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 MNDAP41218 407 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 FAM199XQ6PEV8 388 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SLC16A9Q7RTY1 509 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 CCDC24Q8N4L8 307 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SLC41A3Q96GZ6 507 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 RPL26L1Q9UNX3 145 aaKnown RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF891A8MT65 544 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 GTF3C2Q8WUA4 911 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 BARX2Q9UMQ3 279 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NARSO43776 548 aaKnown RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SEPHS1P49903 392 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NIPAL1Q6NVV3 410 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ZC3H7AQ8IWR0 971 aaKnown RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NACC2Q96BF6 587 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 C11orf24Q96F05 449 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 TMEM8AQ9HCN3 771 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 IKZF3Q9UKT9 509 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NPTXRO95502 500 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF705DP0CH99 300 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF705BP0CI00 300 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 CACNB1Q02641 598 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NAA30Q147X3 362 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SLC44A2Q8IWA5 706 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 FOXRED2Q8IWF2 684 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 GALNT12Q8IXK2 581 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 LIMD1Q9UGP4 676 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 GMPPBQ9Y5P6 360 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 EME2A4GXA9 379 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 HK1P19367 917 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 VAMP1P23763 118 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 EPHB2P29323 1055 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ARCN1P48444 511 aaKnown RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 TIGD3Q6B0B8 471 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 NAGPAQ9UK23 515 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 MDFIC2A0A1B0GVS7 189 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 KRT33AO76009 404 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 FTLP02792 175 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 MECP2P51608 486 aaKnown RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 VAMP2P63027 116 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 GXYLT1Q4G148 440 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SEPHS2Q99611 448 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 FAM86C1Q9NVL1 165 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 HMGXB4Q9UGU5 601 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 PNMA3Q9UL41 463 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 STAP1Q9ULZ2 295 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 ICKQ9UPZ9 632 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 C3orf70A6NLC5 250 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 H3BRB1 525 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 RARGP13631 454 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 HTR2AP28223 471 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 GUCY1A2P33402 732 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 PHKA2P46019 1235 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 CYP24A1Q07973 514 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 DIRAS2Q96HU8 199 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 OR5B12Q96R08 314 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 TMBIM4Q9HC24 238 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 PRDM8Q9NQV8 689 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 FAM49BQ9NUQ9 324 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 DNAJB4Q9UDY4 337 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 F5H6K3 240 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 KCNA5P22460 613 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 DLSTP36957 453 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SMIM11AP58511 58 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 KLRC3Q07444 240 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 MTF1Q14872 753 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 UBE2SQ16763 222 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL12A1-211ENST00000615798 OR10A4Q9H209 315 aa9.35□□□□□ -0.91
COL12A1-211ENST00000615798 SBK2P0C263 348 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 VLDLRP98155 873 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 MAPK7Q13164 816 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 BHLHE22Q8NFJ8 381 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 OR2L2Q8NH16 312 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ASIC4Q96FT7 647 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 CCDC106Q9BWC9 280 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ELL3Q9HB65 397 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms