RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 DDX3YO15523 660 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ZNF623O75123 536 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 BMP10O95393 424 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 NDST3O95803 873 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 UNGP13051 313 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CDKN2BP42772 138 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CRADDP78560 199 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CDC16Q13042 620 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 TRIM32Q13049 653 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 PTPRNQ16849 979 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ATP6AP1LQ52LC2 224 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 TCP10LQ8TDR4 215 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 UBE2E3Q969T4 207 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 HAPLN3Q96S86 360 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 THUMPD3Q9BV44 507 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 SLC39A8Q9C0K1 460 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 IL1RL2Q9HB29 575 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 PARVBQ9HBI1 364 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ERVK-5Q9HDB9 667 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ANLNQ9NQW6 1124 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 SAGE1Q9NXZ1 904 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 IGKV6D-21A0A0A0MT36 114 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 A0A1W2PRU2 124 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 C5orf60A6NFR6 353 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 F8W810 466 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 IRAK2O43187 625 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 DGKIO75912 1065 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ASLP04424 464 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 UGT2B4P06133 528 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 FAM153BP0C7A2 387 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 HSPA1AP0DMV8 641 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 HSPA1BP0DMV9 641 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 HADHBP55084 474 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 FAM153CQ494X1 144 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 LAYNQ6UX15 382 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ANKS1BQ7Z6G8 1248 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 RASGEF1CQ8N431 466 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ZNF655Q8N720 491 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 OR4L1Q8NH43 312 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 SCAMP5Q8TAC9 235 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 AUTS2Q8WXX7 1259 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 PGM2Q96G03 612 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 SLC4A5Q9BY07 1137 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 MID1IP1Q9NPA3 183 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 PHPT1Q9NRX4 125 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 FZD10Q9ULW2 581 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CHKBQ9Y259 395 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 DTNAQ9Y4J8 743 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 RAI2Q9Y5P3 530 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 VPS4BO75351 444 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 POP4O95707 220 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 PIRTP0C851 137 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 AMD1P17707 334 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 TPSB2P20231 275 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CXCR2P25025 360 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CHI3L1P36222 383 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 AQP5P55064 265 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 GBE1Q04446 702 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 GRSF1Q12849 480 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 TPSAB1Q15661 275 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 DUPD1Q68J44 220 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 PATL1Q86TB9 770 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ST13P4Q8IZP2 240 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 TNS4Q8IZW8 715 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 OR6K2Q8NGY2 324 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 METTL6Q8TCB7 284 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 SH3RF2Q8TEC5 729 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 NTAN1Q96AB6 310 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 NAF1Q96HR8 494 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 THTPAQ9BU02 230 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ADAMTS10Q9H324 1103 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 EFCAB1Q9HAE3 211 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ZFYVE1Q9HBF4 777 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CLIC5Q9NZA1 410 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 HEY2Q9UBP5 337 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 EVLQ9UI08 416 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 MYH13Q9UKX3 1938 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 CCT8L1PA6NM43 557 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 PPEF2O14830 753 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 PHGDHO43175 533 aaKnown RBP9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 SLC25A14O95258 325 aaPredicted RBP9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 MLNP12872 115 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 CSF2RAP15509 400 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 C21orf59P57076 290 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 IL10RBQ08334 325 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 DET1Q7L5Y6 550 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 FEM1CQ96JP0 617 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 SH3GL1Q99961 368 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 THAP1Q9NVV9 213 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 HMGXB4Q9UGU5 601 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 FBXO5Q9UKT4 447 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 COG5Q9UP83 839 aa9.52□□□□□ -0.88
CLTCL1-208ENST00000615606 MATN3O15232 486 aa9.52□□□□□ -0.89
CLTCL1-208ENST00000615606 SLC2A4P14672 509 aa9.52□□□□□ -0.89
CLTCL1-208ENST00000615606 MC4RP32245 332 aa9.52□□□□□ -0.89
CLTCL1-208ENST00000615606 PSMD8P48556 350 aa9.52□□□□□ -0.89
CLTCL1-208ENST00000615606 SLC1A6P48664 564 aa9.52□□□□□ -0.89
CLTCL1-208ENST00000615606 INPP1P49441 399 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms