RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 KCTD11Q693B1 232 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ALG1LQ6GMV1 187 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 C22orf39Q6P5X5 142 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 PKN3Q6P5Z2 889 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 KDELC1Q6UW63 502 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ARHGEF18Q6ZSZ5 1173 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF534Q76KX8 674 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 PRPF39Q86UA1 669 aaKnown RBP8.15□□□□□ -1.1
PCDH9-205ENST00000614931 CCDC117Q8IWD4 279 aaPredicted RBP8.15□□□□□ -1.1
PCDH9-205ENST00000614931 AHI1Q8N157 1196 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 SH2D3CQ8N5H7 860 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 GPR161Q8N6U8 529 aaKnown RBP8.15□□□□□ -1.1
PCDH9-205ENST00000614931 NAT8LQ8N9F0 302 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 FBXO25Q8TCJ0 367 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 WFIKKN2Q8TEU8 576 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 IFT81Q8WYA0 676 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 PRCCQ92733 491 aaPredicted RBP8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ART4Q93070 314 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 EXOC4Q96A65 974 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ACDQ96AP0 544 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 TADA1Q96BN2 335 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 PSKH2Q96QS6 385 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 FCRL5Q96RD9 977 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 VAT1Q99536 393 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 P2RY13Q9BPV8 354 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 MGME1Q9BQP7 344 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 C2orf49Q9BVC5 232 aaPredicted RBP8.15□□□□□ -1.1
PCDH9-205ENST00000614931 RAB17Q9H0T7 212 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 MTG2Q9H4K7 406 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ZDHHC4Q9NPG8 344 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 RAB6BQ9NRW1 208 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 UBP1Q9NZI7 540 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 WHRNQ9P202 907 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 DEC1Q9P2X7 70 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 RSPH14Q9UHP6 348 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 FEZ2Q9UHY8 353 aaPredicted RBP8.15□□□□□ -1.1
PCDH9-205ENST00000614931 SLCO3A1Q9UIG8 710 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 TRHDEQ9UKU6 1024 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 NFU1Q9UMS0 254 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ERVW-1Q9UQF0 538 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 HS3ST2Q9Y278 367 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 UTP11Q9Y3A2 253 aaKnown RBP8.15□□□□□ -1.1
PCDH9-205ENST00000614931 TTLL3Q9Y4R7 772 aa8.15□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF106Q9H2Y7 1883 aaKnown RBP8.15□□□□□ -1.11
PCDH9-205ENST00000614931 TTC34A8MYJ7 566 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CHURC1-FNTBB4DL54 471 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 HRO43593 1189 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 BANF1O75531 89 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 STK10O94804 968 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FAM153BP0C7A2 387 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 POLR2EP19388 210 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 TPSB2P20231 275 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CNR2P34972 360 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FDFT1P37268 417 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 EIF2DP41214 584 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CD86P42081 329 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 GRIA1P42261 906 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FNTBP49356 437 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 RENBPP51606 427 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 PLTPP55058 493 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 SKOR1P84550 965 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 ECT2LQ008S8 904 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 SPARCL1Q14515 664 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 RFTN1Q14699 578 aaPredicted RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 TPSAB1Q15661 275 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 PARP6Q2NL67 630 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FAM153CQ494X1 144 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FBXO43Q4G163 708 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 INO80DQ53TQ3 878 aaPredicted RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 EMC10Q5UCC4 262 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 EGFLAMQ63HQ2 1017 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 ITPRIPL1Q6GPH6 555 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 WDR93Q6P2C0 686 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CCNI2Q6ZMN8 369 aaPredicted RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 LONP2Q86WA8 852 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 AGGF1Q8N302 714 aaeCLIP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 DCLK2Q8N568 766 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 ZNF366Q8N895 744 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 PDCD7Q8N8D1 485 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 ZNF557Q8N988 423 aaPredicted RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 OR6K2Q8NGY2 324 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FRS2Q8WU20 508 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 LRRC45Q96CN5 670 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 IMP4Q96G21 291 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 RBM15Q96T37 977 aaKnown RBP eCLIP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 ACOX2Q99424 681 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 SEMA3CQ99985 751 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 WDR83Q9BRX9 315 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CINPQ9BW66 212 aaPredicted RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 TM6SF2Q9BZW4 377 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CIPCQ9C0C6 399 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 SLC25A51Q9H1U9 297 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 TNKS2Q9H2K2 1166 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FAM114A2Q9NRY5 505 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 ELOVL2Q9NXB9 296 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 SEPT3Q9UH03 358 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 FAM153AQ9UHL3 310 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 TPX2Q9ULW0 747 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 HPCAL4Q9UM19 191 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms