RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 KLHL32Q96NJ5 620 aa18.13■□□□□ 0.49
SMN2-213ENST00000614240 C1QTNF7Q9BXJ2 289 aa18.13■□□□□ 0.49
SMN2-213ENST00000614240 NAA15Q9BXJ9 866 aaKnown RBP18.13■□□□□ 0.49
SMN2-213ENST00000614240 MAGEH1Q9H213 219 aa18.13■□□□□ 0.49
SMN2-213ENST00000614240 RETREG1Q9H6L5 497 aa18.13■□□□□ 0.49
SMN2-213ENST00000614240 APOBEC3BQ9UH17 382 aaKnown RBP18.13■□□□□ 0.49
SMN2-213ENST00000614240 TRPM6Q9BX84 2022 aa18.13■□□□□ 0.49
SMN2-213ENST00000614240 PTPRQQ9UMZ3 2332 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 CXorf51AA0A1B0GTR3 108 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 TPP1O14773 563 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 SPINT1O43278 529 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 BUB1O43683 1085 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 RAMP2O60895 175 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 GFPT2O94808 682 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 ANXA6P08133 673 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 PLEKP08567 350 aaPredicted RBP18.12■□□□□ 0.49
SMN2-213ENST00000614240 PFN3P60673 137 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 NRG1Q02297 640 aaPredicted RBP18.12■□□□□ 0.49
SMN2-213ENST00000614240 RAD51Q06609 339 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 EIF2B5Q13144 721 aaKnown RBP18.12■□□□□ 0.49
SMN2-213ENST00000614240 CCDC14Q49A88 953 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 RAB6CQ53S08 254 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 TPRG1LQ5T0D9 272 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 FAXCQ5TGI0 409 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 FOXR1Q6PIV2 292 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 CRTC1Q6UUV9 634 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 RBM44Q6ZP01 1051 aaKnown RBP18.12■□□□□ 0.49
SMN2-213ENST00000614240 CXorf40AQ8TE69 158 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 GRAMD1AQ96CP6 724 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 TBC1D31Q96DN5 1066 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 VCPIP1Q96JH7 1222 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 OSBPL1AQ9BXW6 950 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 SLC13A1Q9BZW2 595 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 RAB6CQ9H0N0 254 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 SYNDIG1Q9H7V2 258 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 CPNE5Q9HCH3 593 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 NDFIP2Q9NV92 336 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 TMEM248Q9NWD8 314 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 SATB2Q9UPW6 733 aa18.12■□□□□ 0.49
SMN2-213ENST00000614240 GCN1Q92616 2671 aaKnown RBP18.12■□□□□ 0.49
SMN2-213ENST00000614240 ERVH48-1M5A8F1 160 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 MMP20O60882 483 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 XPAP23025 273 aaPredicted RBP18.11■□□□□ 0.49
SMN2-213ENST00000614240 ADKP55263 362 aaKnown RBP18.11■□□□□ 0.49
SMN2-213ENST00000614240 RHDQ02161 417 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 CFHR1Q03591 330 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 C1orf61Q13536 156 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 PRRT3Q5FWE3 981 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 LRRC73Q5JTD7 316 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 ATXN7L2Q5T6C5 722 aaPredicted RBP18.11■□□□□ 0.49
SMN2-213ENST00000614240 GDPD4Q6W3E5 623 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 NLRP14Q86W24 1093 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 ZNF677Q86XU0 584 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 PHACTR4Q8IZ21 702 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 RBFAQ8N0V3 343 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 SLC30A5Q8TAD4 765 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 GPT2Q8TD30 523 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 SLC20A1Q8WUM9 679 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 ATXN7L3BQ96GX2 97 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 GDAP1L1Q96MZ0 367 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 C11orf70Q9BRQ4 267 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 CLSTN2Q9H4D0 955 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 SAMSN1Q9NSI8 373 aaKnown RBP18.11■□□□□ 0.49
SMN2-213ENST00000614240 DOLKQ9UPQ8 538 aa18.11■□□□□ 0.49
SMN2-213ENST00000614240 EME2A4GXA9 379 aaPredicted RBP18.1■□□□□ 0.49
SMN2-213ENST00000614240 ZSCAN5CA6NGD5 496 aaPredicted RBP18.1■□□□□ 0.49
SMN2-213ENST00000614240 FAM72CH0Y354 149 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 KDELR3O43731 214 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 TM7SF2O76062 418 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 LRIG2O94898 1065 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 MMP8P22894 467 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 CDR2Q01850 454 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 TCP11X2Q5H9J9 407 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 FAM72AQ5TYM5 149 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 MANEALQ5VSG8 457 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 FAM72DQ6L9T8 149 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 STRADAQ7RTN6 431 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 FAM72BQ86X60 149 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 ZNF843Q8N446 348 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 JOSD2Q8TAC2 188 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 NAT6Q93015 286 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 CENPTQ96BT3 561 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 DPH1Q9BZG8 443 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 TCEAL2Q9H3H9 227 aaPredicted RBP18.1■□□□□ 0.49
SMN2-213ENST00000614240 ASCL3Q9NQ33 180 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 TAB2Q9NYJ8 693 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 NOCTQ9UK39 431 aaKnown RBP18.1■□□□□ 0.49
SMN2-213ENST00000614240 LAMA5O15230 3695 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 CELSR3Q9NYQ7 3312 aa18.1■□□□□ 0.49
SMN2-213ENST00000614240 CAPN8A6NHC0 703 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 GCATO75600 419 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 TMCC1O94876 653 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 GJB6O95452 261 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 IGSF6O95976 241 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 CYP1A1P04798 512 aaPredicted RBP18.09■□□□□ 0.49
SMN2-213ENST00000614240 TPM2P07951 284 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 KRT3P12035 628 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 EEF1GP26641 437 aaKnown RBP18.09■□□□□ 0.49
SMN2-213ENST00000614240 IGFALSP35858 605 aa18.09■□□□□ 0.49
SMN2-213ENST00000614240 EIF4A3P38919 411 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms