RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PCDHGA4Q9Y5G9 962 aa10.98□□□□□ -0.65
FAM3A-221ENST00000612856 GPR179Q6PRD1 2367 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 SIGLEC16A6NMB1 481 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 AIM2O14862 343 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 MGEA5O60502 916 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 ESRRBO95718 433 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PTGIRP43119 386 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 CHN2P52757 468 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 DRG2P55039 364 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 BOP1Q14137 746 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 FASTKD3Q14CZ7 662 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 C1QTNF12Q5T7M4 302 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 CCDC80Q76M96 950 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 ULK2Q8IYT8 1036 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 AFAP1L2Q8N4X5 818 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 SEMA3CQ99985 751 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 SDCBP2Q9H190 292 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 APOBEC2Q9Y235 224 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 ADGRA2Q96PE1 1338 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 C15orf38-AP3S2A0A0A6YYH1 394 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 A0A0A6YYK5 440 aaPredicted RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 E2F6O75461 281 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 GMNNO75496 209 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PROCP04070 461 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 KDELR1P24390 212 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PSMB4P28070 264 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 CD86P42081 329 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PLK1P53350 603 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 FBXL19Q6PCT2 694 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 LPCAT2Q7L5N7 544 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 ANKS1BQ7Z6G8 1248 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 ARPINQ7Z6K5 226 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 MON1AQ86VX9 555 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 SLC7A5P2Q9GIP4 190 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 BRD8Q9H0E9 1235 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 MRPL46Q9H2W6 279 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 TASP1Q9H6P5 420 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 WHRNQ9P202 907 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 FOCADQ5VW36 1801 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PRKCGP05129 697 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 POLBP06746 335 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 GALTP07902 379 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 POLR2EP19388 210 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 MMP8P22894 467 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PPARGP37231 505 aaPredicted RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 MAPK9P45984 424 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 HPCAP84074 193 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 FOLH1Q04609 750 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 LSAMPQ13449 338 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 CHI3L2Q15782 390 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 DNAL1Q4LDG9 190 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 SPDYCQ5MJ68 293 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 TXNRD3NBQ6F5E7 133 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 DDIASQ8IXT1 998 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 ENDOVQ8N8Q3 282 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PIWIL1Q96J94 861 aaKnown RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 DRC3Q9H069 523 aa10.97□□□□□ -0.65
FAM3A-221ENST00000612856 PNMA8BQ9ULN7 279 aaPredicted RBP10.97□□□□□ -0.65
FAM3A-221ENST00000612856 UNCXA6NJT0 531 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 ERI2A8K979 691 aaKnown RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 F7P08709 466 aaPredicted RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 MGAT1P26572 445 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 CCNG1P51959 295 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 CAV1Q03135 178 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 UBAP2LQ14157 1087 aaKnown RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 UBXN2BQ14CS0 331 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 TRABD2AQ86V40 505 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 C12orf56Q8IXR9 622 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 TOP6BLQ8N6T0 577 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 CCDC185Q8N715 623 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 ZBTB8BQ8NAP8 495 aaPredicted RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 HTR3CQ8WXA8 447 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 WWP1Q9H0M0 922 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 PCYOX1Q9UHG3 505 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 FAM50BQ9Y247 325 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 A0A0J9YVX5 310 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 RHOBTB1O94844 696 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 ATG7O95352 703 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 EEF1B2P24534 225 aaKnown RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 MATKP42679 507 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 RPL5P46777 297 aaKnown RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 CDK16Q00536 496 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 CCDC15Q0P6D6 951 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 PEX6Q13608 980 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 EFTUD2Q15029 972 aaKnown RBP eCLIP10.96□□□□□ -0.651e-5■■■□□ 16.7
FAM3A-221ENST00000612856 MAP3K21Q5TCX8 1036 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 PSRC1Q6PGN9 363 aaPredicted RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 TAC4Q86UU9 113 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 HERC6Q8IVU3 1022 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 WDR75Q8IWA0 830 aaKnown RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 EXD1Q8NHP7 514 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 C10orf82Q8WW14 230 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 C11orf84Q9BUA3 381 aaPredicted RBP10.96□□□□□ -0.65
FAM3A-221ENST00000612856 WNT6Q9Y6F9 365 aa10.96□□□□□ -0.65
FAM3A-221ENST00000612856 TRIM49D1C9J1S8 452 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 EOMESO95936 686 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 OCM2P0CE71 109 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 OCMP0CE72 109 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms