RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 DRICH1Q6PGQ1 229 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 SPOCD1Q6ZMY3 1216 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 OR6F1Q8NGZ6 308 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 NDNFQ8TB73 568 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 ACTL9Q8TC94 416 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 DDX1Q92499 740 aaKnown RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 ADNPQ9H2P0 1102 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 FAM96AQ9H5X1 160 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 JMJD4Q9H9V9 463 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 EFCAB1Q9HAE3 211 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 GMPR2Q9P2T1 348 aaKnown RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 CFL2Q9Y281 166 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 LAMB1P07942 1786 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 LRRIQ4A6NIV6 560 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 TK2O00142 265 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 HSPA4LO95757 839 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 RALBP11234 206 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 VAMP7P51809 220 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 ILF2Q12905 390 aaKnown RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 DUSP7Q16829 419 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 IGSF11Q5DX21 431 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 ZNF773Q6PK81 442 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 SIMC1Q8NDZ2 872 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 SLC7A3Q8WY07 619 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
CTCFL-218ENST00000608440 TEX264Q9Y6I9 313 aa12.7□□□□□ -0.38
CTCFL-218ENST00000608440 YDJCA8MPS7 323 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 A8MUA0 341 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 NSFP46459 744 aaKnown RBP12.69□□□□□ -0.38
CTCFL-218ENST00000608440 MFAP3P55082 362 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 BNIP2Q12982 314 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 SELPLGQ14242 412 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 STRIP1Q5VSL9 837 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 STEAP3Q658P3 488 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 LRRC8EQ6NSJ5 796 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 TRMT10BQ6PF06 316 aaKnown RBP12.69□□□□□ -0.38
CTCFL-218ENST00000608440 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 ADAMTSL2Q86TH1 951 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 RCOR2Q8IZ40 523 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 ANKFN1Q8N957 763 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 GRPEL2Q8TAA5 225 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 BIRC7Q96CA5 298 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 CYP26B1Q9NR63 512 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 ZC3H7BQ9UGR2 993 aaKnown RBP12.69□□□□□ -0.38
CTCFL-218ENST00000608440 VPS4AQ9UN37 437 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 NAV1Q8NEY1 1877 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 EI24O14681 340 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 AREL1O15033 823 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 GLDCP23378 1020 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 UQCRC1P31930 480 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
CTCFL-218ENST00000608440 PON2Q15165 354 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 BROXQ5VW32 411 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 CCBE1Q6UXH8 406 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-218ENST00000608440 PAGE2Q7Z2X7 111 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 SLC22A15Q8IZD6 547 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 DHRSXQ8N5I4 330 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 MFSD2AQ8NA29 543 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 FAM83FQ8NEG4 500 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-218ENST00000608440 ELMO1Q92556 727 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 SEPT8Q92599 483 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 NKD2Q969F2 451 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-218ENST00000608440 FKBP10Q96AY3 582 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 VMP1Q96GC9 406 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 SLC17A6Q9P2U8 582 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 OAZ3Q9UMX2 235 aa12.69□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L5A8MUK1 530 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 UGT2B11O75310 529 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 SEC24AO95486 1093 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 C1QAP02745 245 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 GTF2E2P29084 291 aaKnown RBP12.68□□□□□ -0.38
CTCFL-218ENST00000608440 CRKP46108 304 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 PSME3P61289 254 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 TAF12Q16514 161 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 EML3Q32P44 896 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 PITRM1Q5JRX3 1037 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 AGMOQ6ZNB7 445 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 ZNF438Q7Z4V0 828 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 OR7A2PQ8NGA2 310 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 MAGEE2Q8TD90 523 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-218ENST00000608440 HERVK_113Q902F9 699 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 SHC3Q92529 594 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 PBXIP1Q96AQ6 731 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 SDCCAG3Q96C92 435 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 MCMBPQ9BTE3 642 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 ADAMTS10Q9H324 1103 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 ZNF358Q9NW07 568 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 COMMD8Q9NX08 183 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 AGTPBP1Q9UPW5 1226 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 hCG_1818297A0A087WSY0 165 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 FADS2P1A8MWK0 482 aa12.68□□□□□ -0.38
CTCFL-218ENST00000608440 RNF103O00237 685 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms