RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 TRMT10CQ7L0Y3 403 aaKnown RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 NPWQ8N729 165 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 PDZD8Q8NEN9 1154 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 HTR3CQ8WXA8 447 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CPT1BQ92523 772 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 RTP4Q96DX8 246 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CELF6Q96J87 481 aaKnown RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CEP295NLQ96MC4 621 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 RBM15Q96T37 977 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 LGMNQ99538 433 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 LBHD1Q9BQE6 289 aaPredicted RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 FERMT1Q9BQL6 677 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 FOXP3Q9BZS1 431 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 EPB41L4BQ9H329 900 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CATSPERBQ9H7T0 1116 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CARS2Q9HA77 564 aaKnown RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 TMEM51Q9NW97 253 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 FNIP2Q9P278 1114 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 HSFX1Q9UBD0 423 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 SLC12A6Q9UHW9 1150 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 NR2E3Q9Y5X4 410 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 RAD54BQ9Y620 910 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 HS3ST4Q9Y661 456 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 KIF26AQ9ULI4 1882 aaPredicted RBP10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 FAM221AA4D161 298 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 LCHNA4D1U4 455 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 SMIM23A6NLE4 172 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 E9PAM4 449 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 F5H423 210 aaPredicted RBP10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 H0YGN5 161 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 RNF103O00237 685 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 TEX28O15482 410 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 FGF10O15520 208 aaPredicted RBP10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 BANF1O75531 89 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 TMEM63AO94886 807 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 CXCL14O95715 111 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 SHBGP04278 402 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 ATP2A2P16615 1042 aaKnown RBP10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 HTR7P34969 479 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 MAGEA4P43358 317 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 LMAN1P49257 510 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 TUBP50607 506 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZNF844Q08AG5 666 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 GALNT2Q10471 571 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 SKIDA1Q1XH10 827 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 KRT71Q3SY84 523 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 TTMPQ5BVD1 217 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 HECTD3Q5T447 861 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 PIK3R6Q5UE93 754 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 PLPP4Q5VZY2 271 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 BNC2Q6ZN30 1099 aaPredicted RBP10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 CENPUQ71F23 418 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 C14orf80Q86SX3 495 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 TADA2BQ86TJ2 420 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 HOOK3Q86VS8 718 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 NAT8LQ8N9F0 302 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 DNAJB8Q8NHS0 232 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 CYB5D2Q8WUJ1 264 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 DEPDC1BQ8WUY9 529 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 GATAD2BQ8WXI9 593 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 OVCA2Q8WZ82 227 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 ARL8AQ96BM9 186 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 SLC39A13Q96H72 371 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 C9orf72Q96LT7 481 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 TMEM74Q96NL1 305 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 CDK5RAP1Q96SZ6 601 aaKnown RBP10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 RAD9AQ99638 391 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 SH3GL2Q99962 352 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 RSRP1Q9BUV0 290 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 KLC2Q9H0B6 622 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 MTIF3Q9H2K0 278 aaKnown RBP10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 PRDM12Q9H4Q4 367 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 ENTPD7Q9NQZ7 604 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 NINJ2Q9NZG7 142 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 TRPM5Q9NZQ8 1165 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 STK39Q9UEW8 545 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 VANGL2Q9ULK5 521 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 NEU3Q9UQ49 428 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 INSL5Q9Y5Q6 135 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 NFS1Q9Y697 457 aa10.05□□□□□ -0.8
CSNK1A1-209ENST00000606299 C5orf60A6NFR6 353 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 E7EVH7 732 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 DFFAO00273 331 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 CHADO15335 359 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 GCATO75600 419 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 IGLV3-27P01718 113 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 CNPP09543 421 aaKnown RBP10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 LINC00271P0C7V0 271 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 IRF1P10914 325 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 HMGA1P17096 107 aaKnown RBP10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 ATP5C1P36542 298 aaKnown RBP10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 EIF3BP55884 814 aaKnown RBP10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 ARL4CP56559 192 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 COG7P83436 770 aa10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 PPIDQ08752 370 aaKnown RBP10.04□□□□□ -0.8
CSNK1A1-209ENST00000606299 PDIA2Q13087 525 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms