RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 MMADHCQ9H3L0 296 aaPredicted RBP4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 SLC32A1Q9H598 525 aa4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 SYNPO2LQ9H987 977 aa4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 SEC61A2Q9H9S3 476 aa4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 SCPEP1Q9HB40 452 aa4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 IL23AQ9NPF7 189 aa4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 ALKBH4Q9NXW9 302 aa4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 NCAPD2Q15021 1401 aa4.09□□□□□ -1.75
IGHV3-29-201ENST00000604817 A0A1W2PQF6 199 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 A4D1N5 150 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 OR2A25A4D2G3 310 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 MBD3L5A6NJ08 208 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 B5MCH6 92 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 M0QZQ0 153 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 SCAMP1O15126 338 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 PJA2O43164 708 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 SEC22BO75396 215 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CFIP05156 583 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 SNRPA1P09661 255 aaKnown RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 C1SP09871 688 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CCDC175P0C221 793 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ATXN1LP0C7T5 689 aaKnown RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CYP19A1P11511 503 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 GAP43P17677 238 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 HK1P19367 917 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 LRPAP1P30533 357 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 TTKP33981 857 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CPA2P48052 419 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 MTHFSP49914 203 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZNF134P52741 427 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 POLGP54098 1239 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 TPD52P55327 224 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 RAC3P60763 192 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ADAM8P78325 824 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 OLR1P78380 273 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 PRAMEP78395 509 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 YWHAHQ04917 246 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 KRTAP1-1Q07627 177 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CAMK2DQ13557 499 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 LASP1Q14847 261 aaKnown RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 UBXN2BQ14CS0 331 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 NAA25Q14CX7 972 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ACOX1Q15067 660 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 PPP2R5BQ15173 497 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 TAF7Q15545 349 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 AAK1Q2M2I8 961 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CRY2Q49AN0 593 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 TMEM196Q5HYL7 178 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 SARM1Q6SZW1 724 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 MAMDC4Q6UXC1 1216 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 USP50Q70EL3 339 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 PARS2Q7L3T8 475 aaKnown RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 DNAJC10Q8IXB1 793 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ADAMTSL1Q8N6G6 1762 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 PLD5Q8N7P1 536 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 TMEM116Q8NCL8 245 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 OR14K1Q8NGZ2 314 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 DUSP19Q8WTR2 217 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 POMGNT1Q8WZA1 660 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZBTB45Q96K62 511 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 PHACTR3Q96KR7 559 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 AK8Q96MA6 479 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 C5orf34Q96MH7 638 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 NAA11Q9BSU3 229 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZNF747Q9BV97 191 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 KLC2Q9H0B6 622 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CXorf36Q9H7Y0 433 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 NRDE2Q9H7Z3 1164 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 POLR1BQ9H9Y6 1135 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 GBA2Q9HCG7 927 aaPredicted RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 MID1IP1Q9NPA3 183 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 NRIP3Q9NQ35 241 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 ARHGEF3Q9NR81 526 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 MPP6Q9NZW5 540 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CPSF2Q9P2I0 782 aaKnown RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 AKAP11Q9UKA4 1901 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 PADI1Q9ULC6 663 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 SUFUQ9UMX1 484 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 SYNRGQ9UMZ2 1314 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 CDYLQ9Y232 598 aa4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 MRPS17Q9Y2R5 130 aaKnown RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 RRP15Q9Y3B9 282 aaKnown RBP4.08□□□□□ -1.76
IGHV3-29-201ENST00000604817 POLR2AP24928 1970 aaKnown RBP4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 CACNA1SQ13698 1873 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 ADAMTS7Q9UKP4 1686 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 RNF123Q5XPI4 1314 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZNF541Q9H0D2 1346 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 CDHR4A6H8M9 788 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 C16orf96A6NNT2 1141 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 DNM1LO00429 736 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 CTDSP2O14595 271 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZBTB14O43829 449 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 EXOC3O60645 756 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 HNRNPCL1O60812 293 aaKnown RBP4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 SOCS5O75159 536 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 POMCP01189 267 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 PEPDP12955 493 aa4.07□□□□□ -1.76
IGHV3-29-201ENST00000604817 KCNA2P16389 499 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms