RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 NAT6Q93015 286 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 KLF6Q99612 283 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 ZDHHC6Q9H6R6 413 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 IGLON5A6NGN9 336 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 ERVH48-1M5A8F1 160 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 KDELR3O43731 214 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 RAMP2O60895 175 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 CSO75390 466 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 CD160O95971 181 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 CYP1A1P04798 512 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 MMEP08473 750 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 BLKP51451 505 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 THOP1P52888 689 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 TMPRSS3P57727 454 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 GABREP78334 506 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 ATP11AP98196 1134 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 PDE1CQ14123 709 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 FGL2Q14314 439 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 ISXQ2M1V0 245 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 TCP11X2Q5H9J9 407 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 NAA35Q5VZE5 725 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 RXFP2Q8WXD0 754 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 NTAN1Q96AB6 310 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 CLSTN2Q9H4D0 955 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 TMPRSS4Q9NRS4 437 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 DKK3Q9UBP4 350 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 MFHAS1Q9Y4C4 1052 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 PCDHGA8Q9Y5G5 932 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 TENM4Q6N022 2769 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 ATMQ13315 3056 aa18.09■□□□□ 0.49
SHKBP1-227ENST00000602011 LY6G6EA0A0G2JKS1 128 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 C2CD4BA6NLJ0 364 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 RNF103O00237 685 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 AREL1O15033 823 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 PLEKP08567 350 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 RBMS1P29558 406 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 PEX5P50542 639 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 GSCP56915 257 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 YBEYP58557 167 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 GRM3Q14832 879 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 NR0B2Q15466 257 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 CCDC14Q49A88 953 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 ZNF542PQ5EBM4 170 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 TRNP1Q6NT89 227 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 GDPD4Q6W3E5 623 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 ZNF605Q86T29 641 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 TTC7BQ86TV6 843 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 SCG3Q8WXD2 468 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 CENPTQ96BT3 561 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 TM6SF2Q9BZW4 377 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 METTL5Q9NRN9 209 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 U3KQA8 63 aa18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 TDRD6O60522 2096 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-227ENST00000602011 LMO7DNF2Z398 122 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 TMX2-CTNND1H3BSU7 103 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 KRIT1O00522 736 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 RAD51BO15315 384 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 TM7SF2O76062 418 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 LRIG2O94898 1065 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 MPOP05164 745 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 KRT3P12035 628 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 ACVRL1P37023 503 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 AIF1P55008 147 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 LVRNQ6Q4G3 990 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 LMX1AQ8TE12 382 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 GDAP1L1Q96MZ0 367 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 BOCQ9BWV1 1114 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 CPEB1Q9BZB8 566 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 SLC13A1Q9BZW2 595 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 TTYH3Q9C0H2 523 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 DNAI1Q9UI46 699 aa18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 NOCTQ9UK39 431 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-227ENST00000602011 NEBLO76041 1014 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 ANXA6P08133 673 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 DESP17661 470 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 SOX5P35711 763 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 ELP6Q0PNE2 266 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 DPCR1Q3MIW9 517 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 C2CD6Q53TS8 623 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 FKBP15Q5T1M5 1219 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 ESRP1Q6NXG1 681 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 RBM44Q6ZP01 1051 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 EFL1Q7Z2Z2 1120 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 SLFN11Q7Z7L1 901 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 ARL14Q8N4G2 192 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 EMC1Q8N766 993 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 OR6C4Q8NGE1 309 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 ENOX1Q8TC92 643 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 CXorf40AQ8TE69 158 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 SNRNP27Q8WVK2 155 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 KCNE4Q8WWG9 221 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 KLHL32Q96NJ5 620 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 SLC46A1Q96NT5 459 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 CPNE5Q9HCH3 593 aa18.06■□□□□ 0.48
SHKBP1-227ENST00000602011 CHMP5Q9NZZ3 219 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms