RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 NDUFA10O95299 355 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 GKP32189 559 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 ARL4AP40617 200 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 ABL2P42684 1182 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 SNRPD1P62314 119 aaKnown RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 GALNT2Q10471 571 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 SLC10A2Q12908 348 aaPredicted RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 MMRN1Q13201 1228 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 FGL2Q14314 439 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 IHHQ14623 411 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 UAP1L1Q3KQV9 507 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 ANKRD20A8PQ5CZ79 823 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 ATXN7L2Q5T6C5 722 aaPredicted RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 NCBP2-AS2Q69YL0 99 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 RAD9BQ6WBX8 426 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 LEKR1Q6ZMV7 388 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 KANSL1Q7Z3B3 1105 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 IQCHQ86VS3 1027 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 ZSCAN30Q86W11 494 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 MINDY1Q8N5J2 469 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 TSEN2Q8NCE0 465 aaKnown RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 OR14C36Q8NHC7 312 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 BAHD1Q8TBE0 780 aaPredicted RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 RAPGEF5Q92565 580 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 MAML1Q92585 1016 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 RAB7BQ96AH8 199 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 C1QTNF2Q9BXJ5 285 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 OSBPL1AQ9BXW6 950 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 TM6SF2Q9BZW4 377 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 DEF6Q9H4E7 631 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 IMPACTQ9P2X3 320 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 UBA2Q9UBT2 640 aaPredicted RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 IPO11Q9UI26 975 aaKnown RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 PCDHGB2Q9Y5G2 931 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 EPN1Q9Y6I3 576 aaPredicted RBP8.91□□□□□ -0.98
SSBP4-208ENST00000600628 ZFHX4Q86UP3 3567 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 CELSR3Q9NYQ7 3312 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 CFAP47Q6ZTR5 3102 aa8.91□□□□□ -0.98
SSBP4-208ENST00000600628 EPG5Q9HCE0 2579 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 LRP4O75096 1905 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 C16orf96A6NNT2 1141 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 KPNA3O00505 521 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 INSIG1O15503 277 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 PJA2O43164 708 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 HTRA2O43464 458 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 OPHN1O60890 802 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 DKK1O94907 266 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 FSBPO95073 299 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 KRT7P08729 469 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 CEACAM1P13688 526 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 TIMP2P16035 220 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 KDELR1P24390 212 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 CD38P28907 300 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 SLC1A1P43005 524 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 MAGEA1P43355 309 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 RECQLP46063 649 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 CSNK1EP49674 416 aaKnown RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 SUOXP51687 545 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 NEK3P51956 506 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 CDH6P55285 790 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 SLC10A7Q0GE19 358 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 CCDC15Q0P6D6 951 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 OVGP1Q12889 678 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 GRM3Q14832 879 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 AGERQ15109 404 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 SHBQ15464 509 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 HADHQ16836 314 aaKnown RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 KIF19Q2TAC6 998 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 POM121L1PQ3SYA9 428 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 N4BP2L1Q5TBK1 243 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 TMCO4Q5TGY1 634 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 SLC9A4Q6AI14 798 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 NAPEPLDQ6IQ20 393 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 PSAPL1Q6NUJ1 521 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 TMCO3Q6UWJ1 677 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 ABI3BPQ7Z7G0 1075 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 HORMAD1Q86X24 394 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 ZSWIM9Q86XI8 627 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 TMTC1Q8IUR5 882 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 CBARPQ8N350 705 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 PGBD5Q8N414 524 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 PLD5Q8N7P1 536 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 MFSD2AQ8NA29 543 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 NETO2Q8NC67 525 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 OR2I1PQ8NGU4 316 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 HSPH1Q92598 858 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 PPP1R16AQ96I34 528 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 GDAP1L1Q96MZ0 367 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 ZNF641Q96N77 438 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 OLFM3Q96PB7 478 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 LENG8Q96PV6 779 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 RNF157Q96PX1 679 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 TUBGCP5Q96RT8 1024 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 KLF6Q99612 283 aaPredicted RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 MGME1Q9BQP7 344 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 ERVMER34-1Q9H9K5 563 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 ANKRD6Q9Y2G4 727 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 PPIL1Q9Y3C6 166 aa8.9□□□□□ -0.98
SSBP4-208ENST00000600628 PCDHA13Q9Y5I0 950 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms