RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 CD86P42081 329 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 MSH2P43246 934 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 SGSHP51688 502 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 WNT3AP56704 352 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 RHOAP61586 193 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 AP1S1P61966 158 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 RAD51Q06609 339 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 ILF2Q12905 390 aaKnown RBP12.92□□□□□ -0.34
ZNF548-210ENST00000600442 NAB1Q13506 487 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 TUBB8Q3ZCM7 444 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 FAM78AQ5JUQ0 283 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 SPANXN3Q5MJ09 141 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 HP1BP3Q5SSJ5 553 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-210ENST00000600442 KCTD11Q693B1 232 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 ZNF449Q6P9G9 518 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 MTSS1LQ765P7 747 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 TMEM25Q86YD3 366 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 ADGRG2Q8IZP9 1017 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 AHI1Q8N157 1196 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 CPA6Q8N4T0 437 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.92□□□□□ -0.34
ZNF548-210ENST00000600442 OR52K1Q8NGK4 314 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 GSDMBQ8TAX9 411 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 WFIKKN2Q8TEU8 576 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 FEM1CQ96JP0 617 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 ZSWIM3Q96MP5 696 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 SRPK1Q96SB4 655 aaKnown RBP12.92□□□□□ -0.34
ZNF548-210ENST00000600442 MGME1Q9BQP7 344 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 FICDQ9BVA6 458 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 APOL5Q9BWW9 433 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 NFS1Q9Y697 457 aa12.92□□□□□ -0.34
ZNF548-210ENST00000600442 VPS13AQ96RL7 3174 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 DMDP11532 3685 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 INSIG1O15503 277 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 TIMM44O43615 452 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 AVILO75366 819 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 TMCC1O94876 653 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 IGSF6O95976 241 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 AGTP01019 485 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 ASLP04424 464 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 FGF1P05230 155 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 INHBAP08476 426 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 SP100P23497 879 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 MGAT1P26572 445 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 MZF1P28698 734 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 RECQLP46063 649 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 SCNN1BP51168 640 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 GRM3Q14832 879 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 RASA2Q15283 850 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 PCID2Q5JVF3 399 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 LY6G5CQ5SRR4 150 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 RNF43Q68DV7 783 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 ALG1LQ6GMV1 187 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 TDRPQ86YL5 185 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 NDUFAF2Q8N183 169 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 SPATA22Q8NHS9 363 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 UHMK1Q8TAS1 419 aaKnown RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 ISG20Q96AZ6 181 aaKnown RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 OXNAD1Q96HP4 312 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 ATP6V1G3Q96LB4 118 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 NUDCD1Q96RS6 583 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 MLPHQ9BV36 600 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 CEP44Q9C0F1 390 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 ACSS3Q9H6R3 686 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 TMBIM4Q9HC24 238 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 PPANQ9NQ55 473 aaKnown RBP12.91□□□□□ -0.34
ZNF548-210ENST00000600442 ABCB8Q9NUT2 735 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 NSMCE4AQ9NXX6 385 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 SENP1Q9P0U3 644 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 VPS51Q9UID3 782 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 GGA2Q9UJY4 613 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 OR51B4Q9Y5P0 310 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 WNT6Q9Y6F9 365 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 FAM169AQ9Y6X4 670 aa12.91□□□□□ -0.34
ZNF548-210ENST00000600442 MTCL1Q9Y4B5 1905 aaKnown RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 FAM237BA0A1B0GVD1 139 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 A0A1W2PQ67 120 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 HEATR9A2RTY3 570 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 SMIM23A6NLE4 172 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 HEPACAM2A8MVW5 462 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 AGPSO00116 658 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 RNF40O75150 1001 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 USP1O94782 785 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 ADRA1DP25100 572 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 NFKBIAP25963 317 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 OAS2P29728 719 aaKnown RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 CSNK1DP48730 415 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 SERPINH1P50454 418 aaKnown RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 ST8SIA6P61647 398 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 SNRPD1P62314 119 aaKnown RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 PDE1BQ01064 536 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 DSC2Q02487 901 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 CDK18Q07002 472 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms